Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCS1Q01581 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC008549.2-201ENST00000333482 706 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 MIR765-201ENST00000390226 114 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 SPTLC1P2-201ENST00000407089 121 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 RN7SKP278-201ENST00000410504 342 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 TBCAP2-201ENST00000416175 326 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 SETP10-201ENST00000424368 814 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 EIF4HP2-201ENST00000424380 563 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 CKS1BP6-201ENST00000424932 240 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 ARAFP2-201ENST00000440565 559 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC000111.2-201ENST00000448200 210 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 RFPL4AP3-201ENST00000515267 345 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 OR8A2P-201ENST00000528631 952 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 NPM1P45-201ENST00000583151 559 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 MIR4691-201ENST00000583764 85 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC006116.3-201ENST00000592968 361 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC013244.1-201ENST00000604279 193 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC009163.6-201ENST00000612367 342 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC074140.1-201ENST00000621617 208 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 AC015871.5-202ENST00000623252 701 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 LINC01739-205ENST00000641890 573 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 AL731566.1-201ENST00000620490 1937 ntBASIC4.71□□□□□ -1.66
HMGCS1Q01581 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCS1Q01581 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCS1Q01581 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCS1Q01581 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCS1Q01581 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS1Q01581 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS1Q01581 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS1Q01581 THAP12P4-201ENST00000528321 2266 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS1Q01581 RNA5SP507-201ENST00000363603 121 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 RNU1-106P-201ENST00000384382 164 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 MIR105-2-201ENST00000385083 81 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 AL121878.1-201ENST00000418638 859 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 AL137845.2-201ENST00000444292 988 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC092490.3-201ENST00000545370 572 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC087477.6-201ENST00000559595 843 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC016180.1-201ENST00000567945 403 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 MIR3936-201ENST00000584304 110 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC087783.2-201ENST00000605070 562 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 AL161912.3-201ENST00000605404 628 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 AL022401.1-201ENST00000619498 108 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC018445.2-201ENST00000622987 260 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS1Q01581 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS1Q01581 AP000542.2-201ENST00000623199 6179 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 CASC19-206ENST00000641028 1430 ntBASIC4.7□□□□□ -1.66
HMGCS1Q01581 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGCS1Q01581 AC008758.3-201ENST00000507003 1829 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC007996.1-201ENST00000620414 2821 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS1Q01581 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS1Q01581 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 RNA5SP428-201ENST00000365129 132 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 RN7SKP213-201ENST00000410746 298 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 RPL23AP27-201ENST00000415161 451 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 RN7SL319P-201ENST00000480656 221 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 RPSAP50-201ENST00000481955 852 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC109462.1-201ENST00000491087 368 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms