Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC4P56524 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.58□□□□□ -1.52
HDAC4P56524 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.58□□□□□ -1.52
HDAC4P56524 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC4P56524 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 AC126177.5-201ENST00000549599 178 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC4P56524 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC4P56524 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC4P56524 AC122134.1-201ENST00000565664 1104 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AC079148.1-201ENST00000565944 819 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.58□□□□□ -1.52
HDAC4P56524 AC011458.1-201ENST00000604034 617 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AP004372.1-201ENST00000604842 844 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC4P56524 AL445493.3-201ENST00000619568 477 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AC074140.1-201ENST00000621617 208 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC4P56524 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HDAC4P56524 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.58□□□□□ -1.52
HDAC4P56524 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 AC004817.4-201ENST00000602396 3625 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
HDAC4P56524 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC4P56524 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HDAC4P56524 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HDAC4P56524 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.57□□□□□ -1.52
HDAC4P56524 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 AC079298.1-201ENST00000625026 1619 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HDAC4P56524 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HDAC4P56524 RN7SKP97-201ENST00000410966 333 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.57□□□□□ -1.52
HDAC4P56524 RPL7AP49-201ENST00000429522 581 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AC124944.2-201ENST00000429866 1242 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AL591438.1-201ENST00000433508 581 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AC245517.2-201ENST00000442890 346 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 GXYLT1P1-201ENST00000446657 490 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AC069277.2-201ENST00000454211 432 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.57□□□□□ -1.52
HDAC4P56524 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 CDC42P3-201ENST00000518493 633 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
HDAC4P56524 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.57□□□□□ -1.52
HDAC4P56524 EIF4A2P5-201ENST00000529914 499 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HDAC4P56524 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 YWHABP2-201ENST00000540201 713 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.57□□□□□ -1.52
HDAC4P56524 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 SNX6P1-201ENST00000601728 1224 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AC009027.1-201ENST00000604510 479 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AL021707.7-201ENST00000607991 416 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AC019131.2-201ENST00000609071 870 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AC005840.5-201ENST00000619166 599 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.57□□□□□ -1.52
HDAC4P56524 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HDAC4P56524 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HDAC4P56524 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HDAC4P56524 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 AC073429.2-201ENST00000569694 1444 ntBASIC5.57□□□□□ -1.52
HDAC4P56524 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC4P56524 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.56□□□□□ -1.52
HDAC4P56524 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.56□□□□□ -1.52
HDAC4P56524 CASC19-221ENST00000641309 1382 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC027228.2-201ENST00000567141 2154 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HDAC4P56524 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.56□□□□□ -1.52
HDAC4P56524 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HDAC4P56524 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HDAC4P56524 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms