Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RPL30P9-201ENST00000465586 330 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 AC112206.1-201ENST00000468416 477 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.89□□□□□ -1.47
GFRA1P56159 RPL29P23-201ENST00000486188 442 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 AC096751.1-202ENST00000502691 1067 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 SNX5P1-201ENST00000505757 1041 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.89□□□□□ -1.47
GFRA1P56159 HMGB1P28-201ENST00000507778 552 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 MTCYBP43-201ENST00000513621 740 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 FABP5P5-201ENST00000515537 406 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.89□□□□□ -1.47
GFRA1P56159 AL133399.1-201ENST00000527476 298 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 PSMB7P1-201ENST00000556349 514 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 TRAV15-201ENST00000556680 249 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.89□□□□□ -1.47
GFRA1P56159 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.89□□□□□ -1.47
GFRA1P56159 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.89□□□□□ -1.47
GFRA1P56159 AC234778.2-201ENST00000566241 354 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
GFRA1P56159 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 AL359704.2-201ENST00000604335 521 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 AC126118.1-201ENST00000607744 628 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 AC243756.2-201ENST00000618406 463 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 AC099654.12-201ENST00000639868 649 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 EIF3EP1-201ENST00000433978 1316 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 AL139384.2-201ENST00000613809 3590 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 SMG1P5-202ENST00000529428 4219 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 SMG1P2-201ENST00000566127 4221 ntBASIC5.89□□□□□ -1.47
GFRA1P56159 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA1P56159 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.89□□□□□ -1.47
GFRA1P56159 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA1P56159 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.88□□□□□ -1.47
GFRA1P56159 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 OR2M1P-201ENST00000318104 951 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.88□□□□□ -1.47
GFRA1P56159 RNA5SP512-201ENST00000364550 120 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 RNU1-46P-201ENST00000384425 164 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 RNU6-1122P-201ENST00000384449 107 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 MIR640-201ENST00000385086 96 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 AC245036.1-201ENST00000391727 309 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 RPL23AP29-201ENST00000397284 453 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 ATG4AP1-201ENST00000416893 538 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 LINC00993-201ENST00000420453 540 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 EIF1P1-201ENST00000421436 341 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 RPS27AP7-201ENST00000422792 455 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 CYCSP52-201ENST00000422857 310 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 FMO7P-201ENST00000436045 768 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 UBE2V1P3-201ENST00000439651 417 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 AL353572.1-201ENST00000442490 417 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 AC007383.1-201ENST00000445875 636 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 NPM1P39-201ENST00000449818 867 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 BZW1P1-201ENST00000454901 1240 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 MTND2P33-201ENST00000506452 1031 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 RPL37P25-201ENST00000507308 276 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC023245.2-201ENST00000530760 2978 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
GFRA1P56159 AP002373.2-201ENST00000541631 1060 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 AC137768.1-201ENST00000549998 553 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 AC074029.1-201ENST00000552531 1044 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.88□□□□□ -1.47
GFRA1P56159 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms