Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 AC087683.1-201ENST00000591187 441 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC090181.2-201ENST00000602975 672 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC018690.1-201ENST00000608144 626 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 OR2BH1P-201ENST00000608850 864 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AC079395.2-201ENST00000610982 737 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AC100793.4-201ENST00000613683 429 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.34□□□□□ -1.39
EPHB3P54753 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
EPHB3P54753 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
EPHB3P54753 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.34□□□□□ -1.39
EPHB3P54753 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
EPHB3P54753 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
EPHB3P54753 AL391261.1-201ENST00000555712 1479 ntBASIC6.34□□□□□ -1.4
EPHB3P54753 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
EPHB3P54753 CCAT2-201ENST00000630920 1752 ntBASIC6.34□□□□□ -1.4
EPHB3P54753 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.34□□□□□ -1.4
EPHB3P54753 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
EPHB3P54753 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
EPHB3P54753 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
EPHB3P54753 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHB3P54753 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.33□□□□□ -1.4
EPHB3P54753 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHB3P54753 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 OR10R3P-201ENST00000361688 942 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 U3.28-201ENST00000391249 210 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 RN7SKP166-201ENST00000410812 305 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AC092638.1-201ENST00000411966 1275 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 MTCYBP38-201ENST00000417160 1123 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHB3P54753 CHEK2P5-201ENST00000423877 246 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 IPMKP1-201ENST00000425988 855 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 BX323845.3-201ENST00000428215 527 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC6.33□□□□□ -1.4
EPHB3P54753 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHB3P54753 FABP5P2-201ENST00000439042 408 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 CNOT7P2-201ENST00000441051 832 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHB3P54753 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHB3P54753 AL022237.1-201ENST00000446663 358 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 VN1R34P-201ENST00000447387 883 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AL096803.2-201ENST00000450032 677 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 OR7E157P-201ENST00000494376 911 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AC079140.3-201ENST00000511111 550 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHB3P54753 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHB3P54753 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 AP000873.5-201ENST00000533906 236 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AC087883.1-201ENST00000551882 391 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 NBEAP1-201ENST00000554452 979 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 HNRNPCP1-201ENST00000556181 766 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHB3P54753 AC067852.5-201ENST00000589299 310 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AC020916.2-201ENST00000591242 360 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.33□□□□□ -1.4
EPHB3P54753 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 AC091193.1-201ENST00000604640 448 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 FAM27E4-201ENST00000605259 342 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 AL021918.2-201ENST00000613415 194 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 RMST_10.1-201ENST00000616309 154 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 AC104985.2-201ENST00000620598 500 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
EPHB3P54753 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHB3P54753 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.33□□□□□ -1.4
EPHB3P54753 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHB3P54753 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms