Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NEK3P51956 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.88□□□□□ -1.47
NEK3P51956 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NEK3P51956 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NEK3P51956 AC009229.4-201ENST00000623854 1947 ntBASIC5.87□□□□□ -1.47
NEK3P51956 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
NEK3P51956 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.87□□□□□ -1.47
NEK3P51956 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 OR9K1P-202ENST00000641111 3217 ntBASIC5.87□□□□□ -1.47
NEK3P51956 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NEK3P51956 RNU6-1339P-201ENST00000363574 91 ntBASIC5.87□□□□□ -1.47
NEK3P51956 OR52E6-202ENST00000379946 954 ntBASIC5.87□□□□□ -1.47
NEK3P51956 SNORA5.1-201ENST00000384275 131 ntBASIC5.87□□□□□ -1.47
NEK3P51956 RNU6-298P-201ENST00000390888 96 ntBASIC5.87□□□□□ -1.47
NEK3P51956 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 RPL11P3-201ENST00000395256 523 ntBASIC5.87□□□□□ -1.47
NEK3P51956 RNU2-50P-201ENST00000410494 143 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.87□□□□□ -1.47
NEK3P51956 AC093155.2-201ENST00000420734 937 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AC099336.2-201ENST00000422457 254 ntBASIC5.87□□□□□ -1.47
NEK3P51956 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.87□□□□□ -1.47
NEK3P51956 NPM1P18-201ENST00000434232 732 ntBASIC5.87□□□□□ -1.47
NEK3P51956 ELOCP10-201ENST00000440624 327 ntBASIC5.87□□□□□ -1.47
NEK3P51956 NPM1P19-201ENST00000450070 712 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.87□□□□□ -1.47
NEK3P51956 OR2AF1P-201ENST00000454899 889 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AC004129.2-201ENST00000457229 287 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AC099560.2-201ENST00000457554 255 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AL157777.1-201ENST00000468100 304 ntBASIC5.87□□□□□ -1.47
NEK3P51956 TRBV8-2-201ENST00000475637 270 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AC022215.1-201ENST00000481770 362 ntBASIC5.87□□□□□ -1.47
NEK3P51956 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.87□□□□□ -1.47
NEK3P51956 TMEM97P2-201ENST00000517841 403 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.87□□□□□ -1.47
NEK3P51956 MORF4L1P3-201ENST00000525966 950 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.87□□□□□ -1.47
NEK3P51956 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.87□□□□□ -1.47
NEK3P51956 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.87□□□□□ -1.47
NEK3P51956 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.87□□□□□ -1.47
NEK3P51956 AC010547.6-201ENST00000571789 193 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AC090312.2-201ENST00000582687 378 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AC090330.1-201ENST00000588646 764 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 AL606834.3-201ENST00000602615 496 ntBASIC5.87□□□□□ -1.47
NEK3P51956 PSMA6P4-201ENST00000603247 718 ntBASIC5.87□□□□□ -1.47
NEK3P51956 AC123786.2-201ENST00000603459 275 ntBASIC5.87□□□□□ -1.47
NEK3P51956 ELOCP34-201ENST00000604436 327 ntBASIC5.87□□□□□ -1.47
NEK3P51956 MIR6729-201ENST00000618194 65 ntBASIC5.87□□□□□ -1.47
NEK3P51956 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 OR4G3P-201ENST00000633500 913 ntBASIC5.87□□□□□ -1.47
NEK3P51956 MTCO1P6-201ENST00000481192 1384 ntBASIC5.87□□□□□ -1.47
NEK3P51956 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
NEK3P51956 AL133268.1-201ENST00000405676 1401 ntBASIC5.87□□□□□ -1.47
NEK3P51956 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.87□□□□□ -1.47
NEK3P51956 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NEK3P51956 AL118496.1-201ENST00000440201 1812 ntBASIC5.87□□□□□ -1.47
NEK3P51956 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.87□□□□□ -1.47
NEK3P51956 PHKBP1-201ENST00000450951 1951 ntBASIC5.87□□□□□ -1.47
NEK3P51956 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.87□□□□□ -1.47
NEK3P51956 AC125336.1-201ENST00000508893 2827 ntBASIC5.87□□□□□ -1.47
NEK3P51956 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NEK3P51956 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
NEK3P51956 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NEK3P51956 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
NEK3P51956 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
NEK3P51956 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NEK3P51956 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NEK3P51956 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NEK3P51956 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NEK3P51956 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NEK3P51956 RNU6-549P-201ENST00000384433 107 ntBASIC5.86□□□□□ -1.47
NEK3P51956 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NEK3P51956 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 RPL6P29-201ENST00000414863 865 ntBASIC5.86□□□□□ -1.47
NEK3P51956 MTND4P11-201ENST00000417020 1058 ntBASIC5.86□□□□□ -1.47
NEK3P51956 CHEK2P5-201ENST00000423877 246 ntBASIC5.86□□□□□ -1.47
NEK3P51956 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 VTI1BP4-201ENST00000427516 527 ntBASIC5.86□□□□□ -1.47
NEK3P51956 AP001324.1-201ENST00000428553 399 ntBASIC5.86□□□□□ -1.47
NEK3P51956 ELOCP6-201ENST00000429066 328 ntBASIC5.86□□□□□ -1.47
NEK3P51956 SUMO2P3-201ENST00000438311 288 ntBASIC5.86□□□□□ -1.47
NEK3P51956 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 AL645638.1-201ENST00000440519 361 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms