Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MIR3176-201ENST00000582210 90 ntBASIC5.11□□□□□ -1.59
SLC1A1P43005 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC1A1P43005 AC010424.2-201ENST00000607594 443 ntBASIC5.11□□□□□ -1.59
SLC1A1P43005 AL451049.1-201ENST00000608672 497 ntBASIC5.11□□□□□ -1.59
SLC1A1P43005 AC004808.2-201ENST00000627965 773 ntBASIC5.11□□□□□ -1.59
SLC1A1P43005 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC1A1P43005 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC1A1P43005 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC1A1P43005 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC1A1P43005 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC1A1P43005 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC1A1P43005 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC1A1P43005 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC1A1P43005 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SLC1A1P43005 RNA5SP455-201ENST00000365190 119 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SLC1A1P43005 AL133268.1-201ENST00000405676 1401 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 RN7SKP247-201ENST00000411094 308 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC1A1P43005 TBCAP2-201ENST00000416175 326 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 E2F6P2-201ENST00000420708 748 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 AC005033.1-201ENST00000428904 813 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 AC117394.1-201ENST00000477323 567 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 AC116562.1-201ENST00000485355 781 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC1A1P43005 AC106872.4-201ENST00000510050 523 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 RPL7L1P4-201ENST00000513004 707 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC1A1P43005 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC1A1P43005 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC1A1P43005 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC1A1P43005 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC1A1P43005 OR11J2P-201ENST00000555298 907 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 AC087477.6-201ENST00000559595 843 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC1A1P43005 AC097461.1-201ENST00000568928 2821 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC1A1P43005 AL161912.3-201ENST00000605404 628 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC1A1P43005 AP003072.5-201ENST00000623872 773 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 AC000123.3-201ENST00000624029 4975 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 MIR4302-201ENST00000638058 60 ntBASIC5.1□□□□□ -1.59
SLC1A1P43005 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SLC1A1P43005 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SLC1A1P43005 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC1A1P43005 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC1A1P43005 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC1A1P43005 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC1A1P43005 MAPK10-349ENST00000641767 3661 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC1A1P43005 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC1A1P43005 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC1A1P43005 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC1A1P43005 OR56A4-201ENST00000330728 1209 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC1A1P43005 AL163193.1-201ENST00000444895 788 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 AL589765.3-201ENST00000446084 462 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 MTND6P5-201ENST00000448266 512 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC1A1P43005 AC090114.3-201ENST00000479267 829 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC1A1P43005 AC091544.1-201ENST00000484702 348 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC1A1P43005 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC1A1P43005 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC1A1P43005 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC1A1P43005 KCTD9P6-201ENST00000522306 950 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC1A1P43005 AC010547.7-201ENST00000570323 333 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 MIR4310-201ENST00000582950 57 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 MIR4691-201ENST00000583764 85 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 CR381572.2-201ENST00000624852 397 ntBASIC5.09□□□□□ -1.59
SLC1A1P43005 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC1A1P43005 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SLC1A1P43005 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC1A1P43005 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SLC1A1P43005 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC1A1P43005 SALL4P2-201ENST00000423288 2910 ntBASIC5.09□□□□□ -1.6
SLC1A1P43005 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
SLC1A1P43005 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SLC1A1P43005 NEAT1-202ENST00000501122 22743 ntBASIC5.09□□□□□ -1.6
SLC1A1P43005 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 HCFC2P1-201ENST00000392864 1592 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms