Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RN7SL441P-201ENST00000492388 296 ntBASIC6.2□□□□□ -1.42
RFC4P35249 AC138409.2-202ENST00000507274 458 ntBASIC6.2□□□□□ -1.42
RFC4P35249 AC020937.1-201ENST00000519677 1013 ntBASIC6.2□□□□□ -1.42
RFC4P35249 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC4P35249 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC4P35249 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RFC4P35249 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC4P35249 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.2□□□□□ -1.42
RFC4P35249 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC4P35249 AP005119.2-201ENST00000579735 1105 ntBASIC6.2□□□□□ -1.42
RFC4P35249 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC4P35249 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC4P35249 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC4P35249 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFC4P35249 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC4P35249 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
RFC4P35249 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC4P35249 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC4P35249 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC4P35249 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.19□□□□□ -1.42
RFC4P35249 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC4P35249 AL355834.1-201ENST00000556602 3965 ntBASIC6.19□□□□□ -1.42
RFC4P35249 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC4P35249 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC4P35249 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RFC4P35249 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC4P35249 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC4P35249 DPPA2P2-201ENST00000418220 897 ntBASIC6.19□□□□□ -1.42
RFC4P35249 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 RPL7AP49-201ENST00000429522 581 ntBASIC6.19□□□□□ -1.42
RFC4P35249 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 AL591438.1-201ENST00000433508 581 ntBASIC6.19□□□□□ -1.42
RFC4P35249 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC4P35249 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC4P35249 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 AL136455.1-201ENST00000441083 1240 ntBASIC6.19□□□□□ -1.42
RFC4P35249 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RFC4P35249 AC111000.6-201ENST00000514471 709 ntBASIC6.19□□□□□ -1.42
RFC4P35249 RNU2-30P-201ENST00000516209 141 ntBASIC6.19□□□□□ -1.42
RFC4P35249 RNA5SP464-201ENST00000516251 108 ntBASIC6.19□□□□□ -1.42
RFC4P35249 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC4P35249 KPNA2P3-201ENST00000584190 848 ntBASIC6.19□□□□□ -1.42
RFC4P35249 AC022726.1-201ENST00000587475 207 ntBASIC6.19□□□□□ -1.42
RFC4P35249 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC4P35249 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC4P35249 AC068446.1-201ENST00000556425 1549 ntBASIC6.19□□□□□ -1.42
RFC4P35249 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC4P35249 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RFC4P35249 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RFC4P35249 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.18□□□□□ -1.42
RFC4P35249 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFC4P35249 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
RFC4P35249 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFC4P35249 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
RFC4P35249 SEPT7P2-202ENST00000398921 823 ntBASIC6.18□□□□□ -1.42
RFC4P35249 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RFC4P35249 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.18□□□□□ -1.42
RFC4P35249 RN7SKP17-201ENST00000411242 351 ntBASIC6.18□□□□□ -1.42
RFC4P35249 RPEP3-201ENST00000425462 676 ntBASIC6.18□□□□□ -1.42
RFC4P35249 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.18□□□□□ -1.42
RFC4P35249 AC133555.2-201ENST00000550213 292 ntBASIC6.18□□□□□ -1.42
RFC4P35249 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.18□□□□□ -1.42
RFC4P35249 NDUFB4P11-201ENST00000560510 395 ntBASIC6.18□□□□□ -1.42
RFC4P35249 AC005191.1-201ENST00000603950 358 ntBASIC6.18□□□□□ -1.42
RFC4P35249 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.18□□□□□ -1.42
RFC4P35249 AL049794.2-201ENST00000616301 365 ntBASIC6.18□□□□□ -1.42
RFC4P35249 AL592148.3-201ENST00000608771 2646 ntBASIC6.18□□□□□ -1.42
RFC4P35249 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
RFC4P35249 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFC4P35249 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
RFC4P35249 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFC4P35249 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFC4P35249 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.17□□□□□ -1.42
RFC4P35249 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFC4P35249 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RFC4P35249 AL035079.1-201ENST00000405210 287 ntBASIC6.17□□□□□ -1.42
RFC4P35249 AC023141.6-201ENST00000429418 337 ntBASIC6.17□□□□□ -1.42
RFC4P35249 NPM1P33-201ENST00000438918 872 ntBASIC6.17□□□□□ -1.42
RFC4P35249 AC010618.1-201ENST00000469924 477 ntBASIC6.17□□□□□ -1.42
RFC4P35249 AC093824.1-201ENST00000508796 343 ntBASIC6.17□□□□□ -1.42
RFC4P35249 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.17□□□□□ -1.42
RFC4P35249 BUD31P1-201ENST00000521828 359 ntBASIC6.17□□□□□ -1.42
RFC4P35249 OR8Q1P-201ENST00000526467 655 ntBASIC6.17□□□□□ -1.42
RFC4P35249 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.17□□□□□ -1.42
RFC4P35249 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.17□□□□□ -1.42
RFC4P35249 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.17□□□□□ -1.42
RFC4P35249 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.17□□□□□ -1.42
RFC4P35249 AC010857.1-201ENST00000606398 594 ntBASIC6.17□□□□□ -1.42
RFC4P35249 AC010424.2-201ENST00000607594 443 ntBASIC6.17□□□□□ -1.42
RFC4P35249 MIR6716-201ENST00000613413 80 ntBASIC6.17□□□□□ -1.42
RFC4P35249 AC002044.3-201ENST00000623314 541 ntBASIC6.17□□□□□ -1.42
RFC4P35249 AC243960.7-201ENST00000623532 707 ntBASIC6.17□□□□□ -1.42
RFC4P35249 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms