Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS2P33552 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS2P33552 AC244517.3-201ENST00000616254 1235 ntBASIC3.5□□□□□ -1.85
CKS2P33552 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS2P33552 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.5□□□□□ -1.85
CKS2P33552 AL359757.1-201ENST00000623176 255 ntBASIC3.5□□□□□ -1.85
CKS2P33552 AC011815.3-201ENST00000624194 473 ntBASIC3.5□□□□□ -1.85
CKS2P33552 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS2P33552 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS2P33552 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS2P33552 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS2P33552 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CKS2P33552 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS2P33552 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS2P33552 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CKS2P33552 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS2P33552 CASC19-281ENST00000642118 1554 ntBASIC3.5□□□□□ -1.85
CKS2P33552 MAPK10-304ENST00000641341 3984 ntBASIC3.5□□□□□ -1.85
CKS2P33552 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS2P33552 AC093775.1-201ENST00000624154 1868 ntBASIC3.5□□□□□ -1.85
CKS2P33552 MTND5P23-201ENST00000430812 1655 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC008758.3-201ENST00000507003 1829 ntBASIC3.49□□□□□ -1.85
CKS2P33552 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CKS2P33552 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS2P33552 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CKS2P33552 KARSP1-201ENST00000451871 1752 ntBASIC3.49□□□□□ -1.85
CKS2P33552 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.49□□□□□ -1.85
CKS2P33552 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS2P33552 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CKS2P33552 AL121950.1-201ENST00000624993 2077 ntBASIC3.49□□□□□ -1.85
CKS2P33552 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CKS2P33552 OR56A4-201ENST00000330728 1209 ntBASIC3.49□□□□□ -1.85
CKS2P33552 MIR448-201ENST00000362131 111 ntBASIC3.49□□□□□ -1.85
CKS2P33552 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS2P33552 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS2P33552 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CKS2P33552 SNORA67-201ENST00000384423 137 ntBASIC3.49□□□□□ -1.85
CKS2P33552 RNU1-77P-201ENST00000390868 162 ntBASIC3.49□□□□□ -1.85
CKS2P33552 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CKS2P33552 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.49□□□□□ -1.85
CKS2P33552 RN7SKP216-201ENST00000411050 312 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS2P33552 PTP4A1P1-201ENST00000420539 515 ntBASIC3.49□□□□□ -1.85
CKS2P33552 CYCSP6-201ENST00000434498 302 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC110602.1-201ENST00000437414 318 ntBASIC3.49□□□□□ -1.85
CKS2P33552 TCEA1P1-201ENST00000449716 880 ntBASIC3.49□□□□□ -1.85
CKS2P33552 RANP1-206ENST00000455094 651 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC007386.1-201ENST00000455212 582 ntBASIC3.49□□□□□ -1.85
CKS2P33552 RNU7-157P-201ENST00000459600 66 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC100832.1-201ENST00000471945 383 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC090142.2-201ENST00000483263 416 ntBASIC3.49□□□□□ -1.85
CKS2P33552 EIF1P7-201ENST00000487533 337 ntBASIC3.49□□□□□ -1.85
CKS2P33552 UGT2A3P7-201ENST00000510485 734 ntBASIC3.49□□□□□ -1.85
CKS2P33552 RFPL4AP3-201ENST00000515267 345 ntBASIC3.49□□□□□ -1.85
CKS2P33552 RNA5SP360-201ENST00000516555 118 ntBASIC3.49□□□□□ -1.85
CKS2P33552 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS2P33552 TRIM77BP-201ENST00000524985 1119 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC134349.2-201ENST00000535136 910 ntBASIC3.49□□□□□ -1.85
CKS2P33552 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS2P33552 AC008126.1-201ENST00000549019 480 ntBASIC3.49□□□□□ -1.85
CKS2P33552 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS2P33552 TVP23CP2-201ENST00000571473 623 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS2P33552 EIF1P5-201ENST00000585002 234 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC3.49□□□□□ -1.85
CKS2P33552 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS2P33552 AP002884.5-201ENST00000595053 1132 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.49□□□□□ -1.85
CKS2P33552 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS2P33552 AL137072.1-201ENST00000603444 466 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS2P33552 MIR6774-201ENST00000614651 70 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC131238.1-201ENST00000617135 328 ntBASIC3.49□□□□□ -1.85
CKS2P33552 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS2P33552 AC087821.1-201ENST00000623639 567 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AC073592.6-201ENST00000624271 415 ntBASIC3.49□□□□□ -1.85
CKS2P33552 TEX41-293ENST00000630451 690 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS2P33552 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CKS2P33552 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS2P33552 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS2P33552 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS2P33552 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS2P33552 OR14L1P-202ENST00000641545 3009 ntBASIC3.49□□□□□ -1.85
CKS2P33552 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CKS2P33552 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CKS2P33552 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CKS2P33552 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.48□□□□□ -1.85
CKS2P33552 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.48□□□□□ -1.85
CKS2P33552 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CKS2P33552 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CKS2P33552 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CKS2P33552 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CKS2P33552 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CKS2P33552 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.48□□□□□ -1.85
CKS2P33552 RNA5SP234-201ENST00000363916 119 ntBASIC3.48□□□□□ -1.85
CKS2P33552 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CKS2P33552 AL672167.2-201ENST00000377164 879 ntBASIC3.48□□□□□ -1.85
CKS2P33552 AC007068.1-201ENST00000396690 844 ntBASIC3.48□□□□□ -1.85
CKS2P33552 AL121834.1-202ENST00000404494 277 ntBASIC3.48□□□□□ -1.85
CKS2P33552 AL356968.2-201ENST00000412769 1257 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms