Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC234781.4-201ENST00000419384 244 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 OR2AH1P-201ENST00000425717 928 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC073052.1-201ENST00000440417 714 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC004980.3-201ENST00000447046 365 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 AL031584.1-201ENST00000447169 754 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 MTND6P5-201ENST00000448266 512 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC104849.1-201ENST00000462623 405 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 NIP7P2-201ENST00000485801 544 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMBP28068 RN7SKP5-201ENST00000517045 272 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 MIR3691-201ENST00000578066 90 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC009163.6-201ENST00000612367 342 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC015914.2-201ENST00000618167 288 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 AF117829.2-201ENST00000619538 361 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC015660.5-201ENST00000623238 564 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 CASC19-222ENST00000641321 1173 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMBP28068 Z95327.2-201ENST00000414579 1873 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMBP28068 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 AL513548.1-201ENST00000562904 1724 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC097461.1-201ENST00000568928 2821 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 SNORA77-201ENST00000408716 125 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 RN7SKP125-201ENST00000410481 302 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 QRSL1P2-201ENST00000418582 964 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 AC007394.1-201ENST00000421941 531 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 AC005033.1-201ENST00000428904 813 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 CEACAMP7-201ENST00000444105 496 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 AL389915.2-201ENST00000454576 441 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 AC022795.1-201ENST00000473808 480 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 AC010350.1-201ENST00000504908 231 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 HMGB3P16-201ENST00000508037 287 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 TAS2R6P-201ENST00000605022 826 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 MIR7155-201ENST00000615925 56 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 MIR6730-201ENST00000622213 67 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 AC015871.5-202ENST00000623252 701 ntBASIC3.8□□□□□ -1.8
HLA-DMBP28068 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMBP28068 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMBP28068 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMBP28068 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 OR51H2P-202ENST00000641424 3046 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMBP28068 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC245100.2-201ENST00000454544 1679 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMBP28068 U8.4-201ENST00000363626 134 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 RN7SKP113-201ENST00000363891 295 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 MIR765-201ENST00000390226 114 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms