Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RNA5SP392-201ENST00000516905 112 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.14□□□□□ -1.75
COL8A2P25067 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 AP001880.2-201ENST00000538233 448 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 AC068993.1-201ENST00000546724 589 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 BNIP3P1-201ENST00000547295 580 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 AC093591.2-201ENST00000565254 3843 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 MIR3667-201ENST00000581025 74 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 AC099654.3-201ENST00000447087 1546 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
COL8A2P25067 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
COL8A2P25067 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 TET1P1-201ENST00000426627 2301 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL8A2P25067 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.13□□□□□ -1.75
COL8A2P25067 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
COL8A2P25067 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.13□□□□□ -1.75
COL8A2P25067 SEPT7P2-202ENST00000398921 823 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AL357515.1-201ENST00000402967 542 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 RNA5SP113-201ENST00000410486 84 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.13□□□□□ -1.75
COL8A2P25067 TBCAP2-201ENST00000416175 326 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 OR2B7P-201ENST00000429302 934 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 TCEA1P3-201ENST00000443005 880 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.13□□□□□ -1.75
COL8A2P25067 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.13□□□□□ -1.75
COL8A2P25067 SLC25A18P1-201ENST00000449385 454 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 RBMY2TP-201ENST00000451162 947 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AURKAPS2-201ENST00000454983 333 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.13□□□□□ -1.75
COL8A2P25067 RPS29P33-201ENST00000456717 146 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 RN7SL205P-201ENST00000490174 284 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AC008897.1-201ENST00000494006 347 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 AC002456.2-201ENST00000509356 380 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 RNU6-513P-201ENST00000516104 104 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 RN7SKP276-201ENST00000516242 268 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.13□□□□□ -1.75
COL8A2P25067 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.13□□□□□ -1.75
COL8A2P25067 AC137768.1-201ENST00000549998 553 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 CR383656.6-201ENST00000550518 394 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AC091042.1-201ENST00000579213 173 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 RN7SL52P-201ENST00000584271 284 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.13□□□□□ -1.75
COL8A2P25067 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.13□□□□□ -1.75
COL8A2P25067 AL391358.1-201ENST00000605342 190 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AC018695.5-201ENST00000605872 315 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AL161616.1-201ENST00000611867 286 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AL122125.1-201ENST00000616999 600 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 RN7SL722P-201ENST00000617780 284 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 RN7SL565P-201ENST00000618246 284 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AC243960.7-201ENST00000623532 707 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
COL8A2P25067 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.13□□□□□ -1.75
COL8A2P25067 ZNF652P1-201ENST00000442420 1309 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 AC022417.1-201ENST00000624768 1303 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.13□□□□□ -1.75
COL8A2P25067 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
COL8A2P25067 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL8A2P25067 PROS2P-201ENST00000474651 1951 ntBASIC4.13□□□□□ -1.75
COL8A2P25067 MAPK10-263ENST00000641052 4307 ntBASIC4.12□□□□□ -1.75
COL8A2P25067 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
COL8A2P25067 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL8A2P25067 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL8A2P25067 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
COL8A2P25067 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL8A2P25067 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.12□□□□□ -1.75
COL8A2P25067 AC013442.1-201ENST00000397347 228 ntBASIC4.12□□□□□ -1.75
COL8A2P25067 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.12□□□□□ -1.75
COL8A2P25067 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
COL8A2P25067 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL8A2P25067 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.12□□□□□ -1.75
COL8A2P25067 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.12□□□□□ -1.75
COL8A2P25067 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.12□□□□□ -1.75
COL8A2P25067 RPS17P2-201ENST00000461663 408 ntBASIC4.12□□□□□ -1.75
COL8A2P25067 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.12□□□□□ -1.75
COL8A2P25067 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms