Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AP001284.1-201ENST00000528393 2118 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
COL6A2P12110 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
COL6A2P12110 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
COL6A2P12110 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
COL6A2P12110 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.08□□□□□ -1.44
COL6A2P12110 IL6STP1-201ENST00000346911 1020 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 RN7SKP186-201ENST00000365371 303 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.08□□□□□ -1.44
COL6A2P12110 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 RNU6-185P-201ENST00000384421 107 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 Y_RNA.560-201ENST00000384689 102 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 U3.23-201ENST00000391132 200 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 SNORA77.2-201ENST00000408571 112 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 AC006509.1-201ENST00000420788 634 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC007435.1-201ENST00000421086 415 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 AC092651.1-201ENST00000426110 312 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.08□□□□□ -1.44
COL6A2P12110 AP001324.1-201ENST00000428553 399 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 MTCO1P3-201ENST00000429327 192 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 AL591503.2-201ENST00000442314 1005 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 RPSAP40-201ENST00000442343 891 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.08□□□□□ -1.44
COL6A2P12110 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.08□□□□□ -1.44
COL6A2P12110 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.08□□□□□ -1.44
COL6A2P12110 AP003385.3-201ENST00000472498 287 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 RN7SL790P-201ENST00000474043 298 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC090114.3-201ENST00000479267 829 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.08□□□□□ -1.44
COL6A2P12110 RPS6P4-201ENST00000494693 758 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.08□□□□□ -1.44
COL6A2P12110 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.08□□□□□ -1.44
COL6A2P12110 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.08□□□□□ -1.44
COL6A2P12110 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.08□□□□□ -1.44
COL6A2P12110 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.08□□□□□ -1.44
COL6A2P12110 AC134698.4-201ENST00000523451 826 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC092851.1-201ENST00000535964 478 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 NPM1P42-201ENST00000560329 862 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.08□□□□□ -1.44
COL6A2P12110 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 SNORD39.2-201ENST00000579995 76 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 MTATP6P3-201ENST00000581686 676 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.08□□□□□ -1.44
COL6A2P12110 VN1R88P-201ENST00000596787 292 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC069545.1-201ENST00000605671 358 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AL591167.1-201ENST00000607321 456 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AL451074.6-201ENST00000608512 729 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC093388.1-201ENST00000609166 430 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 AL590240.3-201ENST00000621416 943 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC068213.1-201ENST00000625124 226 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC090582.1-201ENST00000636321 199 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC006927.3-201ENST00000638789 384 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 AC119674.1-212ENST00000641155 993 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
COL6A2P12110 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.08□□□□□ -1.44
COL6A2P12110 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 ZNF833P-201ENST00000424938 1494 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.08□□□□□ -1.44
COL6A2P12110 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL6A2P12110 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.08□□□□□ -1.44
COL6A2P12110 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.08□□□□□ -1.44
COL6A2P12110 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC096656.1-201ENST00000623826 1364 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms