Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.41□□□□□ -1.38
COL3A1P02461 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.41□□□□□ -1.38
COL3A1P02461 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.41□□□□□ -1.38
COL3A1P02461 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.41□□□□□ -1.38
COL3A1P02461 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.41□□□□□ -1.38
COL3A1P02461 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.41□□□□□ -1.38
COL3A1P02461 AC025165.5-201ENST00000602802 578 ntBASIC6.41□□□□□ -1.38
COL3A1P02461 AC016911.1-201ENST00000613297 452 ntBASIC6.41□□□□□ -1.38
COL3A1P02461 AC009269.6-201ENST00000621778 588 ntBASIC6.41□□□□□ -1.38
COL3A1P02461 AC090772.4-201ENST00000623599 362 ntBASIC6.41□□□□□ -1.38
COL3A1P02461 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.41□□□□□ -1.38
COL3A1P02461 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.41□□□□□ -1.38
COL3A1P02461 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL3A1P02461 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL3A1P02461 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
COL3A1P02461 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.4□□□□□ -1.38
COL3A1P02461 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL3A1P02461 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
COL3A1P02461 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL3A1P02461 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL3A1P02461 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.4□□□□□ -1.38
COL3A1P02461 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL3A1P02461 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL3A1P02461 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
COL3A1P02461 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.4□□□□□ -1.39
COL3A1P02461 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL3A1P02461 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL3A1P02461 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.4□□□□□ -1.39
COL3A1P02461 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.4□□□□□ -1.39
COL3A1P02461 RNU1-82P-201ENST00000390851 165 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 AL049697.2-201ENST00000403708 294 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 RAB28P1-201ENST00000411517 641 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 SMC4P1-201ENST00000414479 527 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 RGS17P1-201ENST00000423358 553 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 CKS1BP6-201ENST00000424932 240 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.4□□□□□ -1.39
COL3A1P02461 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.4□□□□□ -1.39
COL3A1P02461 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL3A1P02461 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.4□□□□□ -1.39
COL3A1P02461 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL3A1P02461 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.4□□□□□ -1.39
COL3A1P02461 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.4□□□□□ -1.39
COL3A1P02461 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.4□□□□□ -1.39
COL3A1P02461 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.4□□□□□ -1.39
COL3A1P02461 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.4□□□□□ -1.39
COL3A1P02461 AC023389.2-201ENST00000580031 955 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 AC127024.5-201ENST00000580085 462 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.4□□□□□ -1.39
COL3A1P02461 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.4□□□□□ -1.39
COL3A1P02461 AC068790.4-201ENST00000602474 263 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 AC112503.2-201ENST00000609005 552 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
COL3A1P02461 AL161616.1-201ENST00000611867 286 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 AC003001.2-201ENST00000616294 831 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 AL731566.2-201ENST00000618971 317 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 MIR6853-201ENST00000619642 74 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.4□□□□□ -1.39
COL3A1P02461 AP000346.3-201ENST00000622821 210 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 AC006453.5-201ENST00000636451 619 ntBASIC6.4□□□□□ -1.39
COL3A1P02461 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL3A1P02461 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL3A1P02461 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
COL3A1P02461 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL3A1P02461 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.39□□□□□ -1.39
COL3A1P02461 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.39□□□□□ -1.39
COL3A1P02461 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.39□□□□□ -1.39
COL3A1P02461 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.39□□□□□ -1.39
COL3A1P02461 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.39□□□□□ -1.39
COL3A1P02461 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL3A1P02461 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
COL3A1P02461 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
COL3A1P02461 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.39□□□□□ -1.39
COL3A1P02461 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL3A1P02461 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
COL3A1P02461 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL3A1P02461 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL3A1P02461 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL3A1P02461 AC008549.2-201ENST00000333482 706 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL3A1P02461 RNU6-398P-201ENST00000384143 109 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL3A1P02461 RPS17P8-201ENST00000434525 335 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 AL138878.2-201ENST00000440581 1241 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.39□□□□□ -1.39
COL3A1P02461 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.39□□□□□ -1.39
COL3A1P02461 AL500527.1-201ENST00000448532 255 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 OR1H1P-201ENST00000448731 937 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 AC009220.1-201ENST00000451614 275 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.39□□□□□ -1.39
COL3A1P02461 RN7SL346P-201ENST00000491561 294 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.39□□□□□ -1.39
COL3A1P02461 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
COL3A1P02461 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.39□□□□□ -1.39
COL3A1P02461 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.39□□□□□ -1.39
COL3A1P02461 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL3A1P02461 AC209154.1-201ENST00000582156 337 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 AL022394.1-201ENST00000606979 292 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.39□□□□□ -1.39
COL3A1P02461 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.39□□□□□ -1.39
COL3A1P02461 AC068620.4-201ENST00000636730 1182 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms