Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 HMGB1P23-201ENST00000518743 568 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.68□□□□□ -1.5
COL2A1P02458 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.68□□□□□ -1.5
COL2A1P02458 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.68□□□□□ -1.5
COL2A1P02458 MRPS21P9-201ENST00000571150 257 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 MIR4277-201ENST00000578298 84 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.68□□□□□ -1.5
COL2A1P02458 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.68□□□□□ -1.5
COL2A1P02458 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL2A1P02458 RBPJP2-201ENST00000618187 1444 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.68□□□□□ -1.5
COL2A1P02458 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.68□□□□□ -1.5
COL2A1P02458 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL2A1P02458 AC104118.1-201ENST00000607625 1589 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL2A1P02458 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.67□□□□□ -1.5
COL2A1P02458 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
COL2A1P02458 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL2A1P02458 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL2A1P02458 RNU1-85P-201ENST00000364127 164 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 RPL7P57-201ENST00000423238 740 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 RPS17P8-201ENST00000434525 335 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 AC097523.2-201ENST00000435551 652 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 CDC27P1-201ENST00000445384 715 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 MRPL35P2-201ENST00000448009 511 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 AC009963.4-201ENST00000448535 339 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 AC034236.1-201ENST00000469891 373 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 AL049874.2-201ENST00000492636 288 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 AC091868.1-201ENST00000508746 304 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.67□□□□□ -1.5
COL2A1P02458 AC097486.1-201ENST00000515331 210 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.67□□□□□ -1.5
COL2A1P02458 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.67□□□□□ -1.5
COL2A1P02458 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.67□□□□□ -1.5
COL2A1P02458 RNA5SP439-201ENST00000617595 124 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 AC011944.2-201ENST00000624440 683 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 MIR6830-201ENST00000636015 70 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
COL2A1P02458 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL2A1P02458 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COL2A1P02458 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.67□□□□□ -1.5
COL2A1P02458 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL2A1P02458 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL2A1P02458 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL2A1P02458 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.67□□□□□ -1.5
COL2A1P02458 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.67□□□□□ -1.5
COL2A1P02458 AC025574.1-201ENST00000554784 1653 ntBASIC5.67□□□□□ -1.5
COL2A1P02458 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL2A1P02458 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.66□□□□□ -1.5
COL2A1P02458 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.66□□□□□ -1.5
COL2A1P02458 MIR134-201ENST00000385258 73 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 RNU4-25P-201ENST00000410569 230 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.66□□□□□ -1.5
COL2A1P02458 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.66□□□□□ -1.5
COL2A1P02458 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL2A1P02458 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.66□□□□□ -1.5
COL2A1P02458 AL136455.1-201ENST00000441083 1240 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL2A1P02458 RPL36AP41-201ENST00000493820 306 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 AC073073.1-201ENST00000493920 463 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
COL2A1P02458 RNU6-709P-201ENST00000517257 104 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 RPL23AP53-201ENST00000521854 457 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.66□□□□□ -1.5
COL2A1P02458 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.66□□□□□ -1.5
COL2A1P02458 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.66□□□□□ -1.5
COL2A1P02458 AC006349.1-201ENST00000555526 235 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.66□□□□□ -1.5
COL2A1P02458 SNORA74C-1-201ENST00000580726 201 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 MIR4715-201ENST00000584117 79 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 AC020915.5-201ENST00000596836 964 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 AC008782.1-201ENST00000603386 430 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.66□□□□□ -1.5
COL2A1P02458 AC005962.2-201ENST00000611427 652 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 MLECP1-201ENST00000615893 709 ntBASIC5.66□□□□□ -1.5
COL2A1P02458 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL2A1P02458 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.66□□□□□ -1.5
COL2A1P02458 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.66□□□□□ -1.5
COL2A1P02458 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL2A1P02458 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL2A1P02458 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL2A1P02458 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.65□□□□□ -1.5
COL2A1P02458 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL2A1P02458 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL2A1P02458 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL2A1P02458 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL2A1P02458 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL2A1P02458 RN7SKP267-201ENST00000410381 285 ntBASIC5.65□□□□□ -1.5
COL2A1P02458 AL591848.1-201ENST00000413092 322 ntBASIC5.65□□□□□ -1.5
COL2A1P02458 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL2A1P02458 AC079168.2-201ENST00000453977 416 ntBASIC5.65□□□□□ -1.5
COL2A1P02458 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.65□□□□□ -1.5
COL2A1P02458 AC025164.1-201ENST00000496249 478 ntBASIC5.65□□□□□ -1.5
COL2A1P02458 AK3P4-201ENST00000504283 583 ntBASIC5.65□□□□□ -1.5
COL2A1P02458 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.65□□□□□ -1.5
COL2A1P02458 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.65□□□□□ -1.5
COL2A1P02458 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.65□□□□□ -1.5
COL2A1P02458 AL109766.1-201ENST00000555080 552 ntBASIC5.65□□□□□ -1.5
COL2A1P02458 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.65□□□□□ -1.5
COL2A1P02458 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms