Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 Y_RNA.126-201ENST00000363382 111 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL1A1P02452 CYP4F29P-201ENST00000420685 446 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.8□□□□□ -1.48
COL1A1P02452 AC234779.1-201ENST00000425910 285 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 AC023141.6-201ENST00000429418 337 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.8□□□□□ -1.48
COL1A1P02452 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.8□□□□□ -1.48
COL1A1P02452 AC013356.1-201ENST00000489027 564 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 RN7SL558P-201ENST00000497468 299 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 AC083829.1-201ENST00000503756 657 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 RNA5SP230-201ENST00000517039 122 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 RNU6-709P-201ENST00000517257 104 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.8□□□□□ -1.48
COL1A1P02452 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.8□□□□□ -1.48
COL1A1P02452 RPL12P25-202ENST00000598100 674 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 AC125494.2-201ENST00000602431 657 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 AC005191.1-201ENST00000603950 358 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.8□□□□□ -1.48
COL1A1P02452 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL1A1P02452 AP000756.2-201ENST00000624168 2567 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL1A1P02452 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL1A1P02452 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.8□□□□□ -1.48
COL1A1P02452 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL1A1P02452 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL1A1P02452 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.8□□□□□ -1.48
COL1A1P02452 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.79□□□□□ -1.48
COL1A1P02452 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.79□□□□□ -1.48
COL1A1P02452 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 AL592293.2-201ENST00000422292 996 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 RPEP3-201ENST00000425462 676 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 AC004975.1-201ENST00000428733 208 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 RPS17P8-201ENST00000434525 335 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 Z95152.1-201ENST00000453556 656 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 AC245028.2-201ENST00000458673 253 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.79□□□□□ -1.48
COL1A1P02452 RPL36AP41-201ENST00000493820 306 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 AC005868.1-201ENST00000536421 331 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.79□□□□□ -1.48
COL1A1P02452 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.79□□□□□ -1.48
COL1A1P02452 MIR3160-1-201ENST00000577972 85 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.79□□□□□ -1.48
COL1A1P02452 Z95327.3-201ENST00000610385 572 ntBASIC5.79□□□□□ -1.48
COL1A1P02452 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.79□□□□□ -1.48
COL1A1P02452 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.79□□□□□ -1.48
COL1A1P02452 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL1A1P02452 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
COL1A1P02452 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL1A1P02452 RN7SKP227-201ENST00000364445 330 ntBASIC5.78□□□□□ -1.48
COL1A1P02452 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.78□□□□□ -1.48
COL1A1P02452 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.78□□□□□ -1.48
COL1A1P02452 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.78□□□□□ -1.48
COL1A1P02452 AC025674.1-201ENST00000507074 324 ntBASIC5.78□□□□□ -1.48
COL1A1P02452 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.78□□□□□ -1.48
COL1A1P02452 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.78□□□□□ -1.48
COL1A1P02452 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.78□□□□□ -1.48
COL1A1P02452 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL1A1P02452 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.78□□□□□ -1.48
COL1A1P02452 AC093765.1-201ENST00000603758 881 ntBASIC5.78□□□□□ -1.48
COL1A1P02452 AL121932.1-201ENST00000605542 214 ntBASIC5.78□□□□□ -1.48
COL1A1P02452 MLECP1-201ENST00000615893 709 ntBASIC5.78□□□□□ -1.48
COL1A1P02452 AL121873.1-201ENST00000616013 524 ntBASIC5.78□□□□□ -1.48
COL1A1P02452 AC011944.2-201ENST00000624440 683 ntBASIC5.78□□□□□ -1.48
COL1A1P02452 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL1A1P02452 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL1A1P02452 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
COL1A1P02452 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
COL1A1P02452 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL1A1P02452 RNA5SP479-201ENST00000364858 117 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.77□□□□□ -1.49
COL1A1P02452 ARL2BPP10-201ENST00000446487 531 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 PPIAP21-201ENST00000464473 501 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.77□□□□□ -1.49
COL1A1P02452 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.77□□□□□ -1.49
COL1A1P02452 AC139713.2-214ENST00000642059 1811 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL1A1P02452 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 SCARNA15-201ENST00000607520 4325 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 RBPJP2-201ENST00000618187 1444 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL1A1P02452 ZFRP1-201ENST00000457579 2970 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms