Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 AC090686.1-201ENST00000481577 749 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 AC016687.1-201ENST00000482574 353 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 AC104109.1-201ENST00000498563 436 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 AC106806.2-201ENST00000509365 500 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.93□□□□□ -1.62
CLPTM1O96005 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.93□□□□□ -1.62
CLPTM1O96005 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 CYCSP22-201ENST00000517555 339 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 NPM1P52-201ENST00000518264 846 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 DPPA2P4-201ENST00000563717 878 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.93□□□□□ -1.62
CLPTM1O96005 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.93□□□□□ -1.62
CLPTM1O96005 AL159169.2-201ENST00000610061 1269 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.93□□□□□ -1.62
CLPTM1O96005 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CLPTM1O96005 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.93□□□□□ -1.62
CLPTM1O96005 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 MRE11P1-201ENST00000464884 2127 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 DDX18P4-201ENST00000511690 1966 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CLPTM1O96005 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.92□□□□□ -1.62
CLPTM1O96005 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 HSPA8P18-201ENST00000439846 1928 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CLPTM1O96005 KARSP1-201ENST00000451871 1752 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 AL353625.1-202ENST00000366273 571 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 AMZ2P2-201ENST00000406819 1057 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 GTF3AP1-201ENST00000416942 1004 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 HSFY7P-201ENST00000432672 318 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 HSFY8P-201ENST00000437934 318 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AC064862.4-201ENST00000442180 334 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 TXNP2-201ENST00000443918 295 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.92□□□□□ -1.62
CLPTM1O96005 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.92□□□□□ -1.62
CLPTM1O96005 HMGN1P36-201ENST00000446623 298 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AC016724.1-201ENST00000453215 421 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 HSFY5P-201ENST00000453726 309 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.92□□□□□ -1.62
CLPTM1O96005 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 RPL7P51-201ENST00000490532 749 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AC109481.1-201ENST00000509173 282 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 SNORA43.3-201ENST00000517240 103 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 SEC11B-201ENST00000518383 499 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 IGLVIV-64-201ENST00000518581 301 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 HMGB1P42-201ENST00000532126 553 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CLPTM1O96005 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 AC074029.2-201ENST00000551045 634 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AL671309.1-201ENST00000603750 544 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AC018695.5-201ENST00000605872 315 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AL008729.2-201ENST00000606393 473 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AC084824.5-201ENST00000612009 413 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms