Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS4BO75351 SNORD116-2-201ENST00000384274 95 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 SNORD116-6-201ENST00000384711 96 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 MT-TP-201ENST00000387461 68 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 AL391361.1-201ENST00000405580 489 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 AC092638.1-201ENST00000411966 1275 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS4BO75351 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS4BO75351 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 HMGB1P49-201ENST00000418882 569 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 MTCO3P4-201ENST00000419236 787 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 HIGD1AP4-201ENST00000430194 280 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 AC099670.2-201ENST00000435130 321 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 AC064862.4-201ENST00000442180 334 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 HSFY3P-201ENST00000444242 1191 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 FTLP8-201ENST00000446770 267 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 AL589880.1-201ENST00000448271 287 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 SBDSP1-204ENST00000453858 737 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS4BO75351 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 BTG4P1-201ENST00000510421 183 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 CR383658.1-201ENST00000514609 734 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 LRRC6P1-201ENST00000532188 885 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS4BO75351 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 AC011611.5-201ENST00000552477 578 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS4BO75351 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS4BO75351 AC022404.1-201ENST00000555320 273 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS4BO75351 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS4BO75351 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 AC068137.4-201ENST00000638485 296 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 AC026523.2-201ENST00000625039 7739 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 MTND5P23-201ENST00000430812 1655 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 AC020633.1-201ENST00000468439 2247 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VPS4BO75351 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS4BO75351 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS4BO75351 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS4BO75351 GAPDHP24-201ENST00000328713 983 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS4BO75351 AL672167.2-201ENST00000377164 879 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS4BO75351 AL136310.1-201ENST00000404926 654 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 OR3A2-201ENST00000408891 1076 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 HMGB3P31-201ENST00000413333 595 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS4BO75351 AL035660.1-201ENST00000422041 222 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 AL354766.1-201ENST00000423396 542 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 USP9YP11-201ENST00000427537 717 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 AC093716.1-201ENST00000435923 377 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS4BO75351 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS4BO75351 AL161722.1-201ENST00000446972 1032 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS4BO75351 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS4BO75351 RN7SL197P-201ENST00000466981 299 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS4BO75351 SCARNA18.1-201ENST00000516330 83 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS4BO75351 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS4BO75351 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS4BO75351 AGGF1P6-201ENST00000569213 976 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 RBM22P1-201ENST00000578589 1214 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS4BO75351 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS4BO75351 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS4BO75351 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS4BO75351 HIRAP1-201ENST00000605318 787 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS4BO75351 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS4BO75351 BX649567.1-201ENST00000642071 1134 ntBASIC5.68□□□□□ -1.5
VPS4BO75351 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VPS4BO75351 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS4BO75351 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS4BO75351 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
VPS4BO75351 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS4BO75351 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms