Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.92□□□□□ -1.62
SSX4O60224 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.92□□□□□ -1.62
SSX4O60224 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.92□□□□□ -1.62
SSX4O60224 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SSX4O60224 AC005034.4-201ENST00000603612 899 ntBASIC4.92□□□□□ -1.62
SSX4O60224 AC079880.2-201ENST00000603790 1213 ntBASIC4.92□□□□□ -1.62
SSX4O60224 AL021707.7-201ENST00000607991 416 ntBASIC4.92□□□□□ -1.62
SSX4O60224 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.92□□□□□ -1.62
SSX4O60224 MIR8084-201ENST00000614105 89 ntBASIC4.92□□□□□ -1.62
SSX4O60224 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSX4O60224 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX4O60224 MIR6719-201ENST00000622428 87 ntBASIC4.92□□□□□ -1.62
SSX4O60224 AC091932.2-201ENST00000623014 291 ntBASIC4.92□□□□□ -1.62
SSX4O60224 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSX4O60224 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX4O60224 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX4O60224 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
SSX4O60224 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX4O60224 AC000374.1-201ENST00000434698 1745 ntBASIC4.92□□□□□ -1.62
SSX4O60224 AC079097.1-201ENST00000512187 1399 ntBASIC4.91□□□□□ -1.62
SSX4O60224 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX4O60224 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 AC100778.3-201ENST00000580060 1750 ntBASIC4.91□□□□□ -1.62
SSX4O60224 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SSX4O60224 AC007382.1-201ENST00000624376 2618 ntBASIC4.91□□□□□ -1.62
SSX4O60224 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX4O60224 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 SNORA74A-201ENST00000364089 198 ntBASIC4.91□□□□□ -1.62
SSX4O60224 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSX4O60224 RNU4-74P-201ENST00000411280 161 ntBASIC4.91□□□□□ -1.62
SSX4O60224 AP000534.2-201ENST00000412729 568 ntBASIC4.91□□□□□ -1.62
SSX4O60224 RPL12P9-201ENST00000412942 488 ntBASIC4.91□□□□□ -1.62
SSX4O60224 NIFKP3-201ENST00000417799 865 ntBASIC4.91□□□□□ -1.62
SSX4O60224 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 OR6K4P-201ENST00000423179 955 ntBASIC4.91□□□□□ -1.62
SSX4O60224 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 FMO7P-201ENST00000436045 768 ntBASIC4.91□□□□□ -1.62
SSX4O60224 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX4O60224 SPRYD7P1-201ENST00000443861 570 ntBASIC4.91□□□□□ -1.62
SSX4O60224 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX4O60224 AC005297.1-201ENST00000444765 862 ntBASIC4.91□□□□□ -1.62
SSX4O60224 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX4O60224 AL606490.1-201ENST00000452266 765 ntBASIC4.91□□□□□ -1.62
SSX4O60224 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX4O60224 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX4O60224 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX4O60224 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX4O60224 AC105384.2-201ENST00000508433 640 ntBASIC4.91□□□□□ -1.62
SSX4O60224 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX4O60224 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX4O60224 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.91□□□□□ -1.62
SSX4O60224 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX4O60224 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX4O60224 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX4O60224 MTCYBP13-201ENST00000578634 1093 ntBASIC4.91□□□□□ -1.62
SSX4O60224 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX4O60224 MTATP6P2-201ENST00000603319 678 ntBASIC4.91□□□□□ -1.62
SSX4O60224 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX4O60224 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 CU639417.4-201ENST00000623928 207 ntBASIC4.91□□□□□ -1.62
SSX4O60224 AC007683.2-201ENST00000624681 714 ntBASIC4.91□□□□□ -1.62
SSX4O60224 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 AL022393.1-201ENST00000625142 1677 ntBASIC4.91□□□□□ -1.62
SSX4O60224 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
SSX4O60224 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX4O60224 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX4O60224 CASC19-248ENST00000641674 1356 ntBASIC4.91□□□□□ -1.62
SSX4O60224 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSX4O60224 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.9□□□□□ -1.62
SSX4O60224 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSX4O60224 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.9□□□□□ -1.62
SSX4O60224 YES1P1-201ENST00000418510 1628 ntBASIC4.9□□□□□ -1.62
SSX4O60224 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSX4O60224 AC114786.1-201ENST00000512892 1415 ntBASIC4.9□□□□□ -1.62
SSX4O60224 MTCO1P4-201ENST00000520516 1409 ntBASIC4.9□□□□□ -1.62
SSX4O60224 RBPJP2-201ENST00000618187 1444 ntBASIC4.9□□□□□ -1.62
SSX4O60224 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SSX4O60224 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSX4O60224 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.9□□□□□ -1.62
SSX4O60224 AP001642.1-201ENST00000624727 2117 ntBASIC4.9□□□□□ -1.62
SSX4O60224 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSX4O60224 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.9□□□□□ -1.62
SSX4O60224 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms