Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL606495.1-201ENST00000422100 813 ntBASIC5.28□□□□□ -1.56
LDB2O43679 MTND4LP13-201ENST00000425022 298 ntBASIC5.28□□□□□ -1.56
LDB2O43679 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.28□□□□□ -1.56
LDB2O43679 CLUHP1-201ENST00000435012 1190 ntBASIC5.28□□□□□ -1.56
LDB2O43679 RPL5P25-201ENST00000441148 775 ntBASIC5.28□□□□□ -1.56
LDB2O43679 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 OR52E3P-201ENST00000452083 936 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AC011225.1-201ENST00000457751 369 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AC108161.1-201ENST00000461060 402 ntBASIC5.28□□□□□ -1.56
LDB2O43679 RPL7P40-201ENST00000481703 745 ntBASIC5.28□□□□□ -1.56
LDB2O43679 NPM1P29-201ENST00000483112 803 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AC026782.2-201ENST00000510845 636 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AC104115.2-201ENST00000523026 687 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.28□□□□□ -1.56
LDB2O43679 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.28□□□□□ -1.56
LDB2O43679 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.28□□□□□ -1.56
LDB2O43679 AC004825.1-201ENST00000555068 586 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.28□□□□□ -1.56
LDB2O43679 AC211433.2-201ENST00000608433 387 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AC008759.3-201ENST00000613300 508 ntBASIC5.28□□□□□ -1.56
LDB2O43679 MIR6837-201ENST00000620884 64 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AC074101.1-201ENST00000637861 241 ntBASIC5.28□□□□□ -1.56
LDB2O43679 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.28□□□□□ -1.56
LDB2O43679 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.28□□□□□ -1.56
LDB2O43679 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.28□□□□□ -1.56
LDB2O43679 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.28□□□□□ -1.56
LDB2O43679 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LDB2O43679 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 AC006210.2-201ENST00000367074 1545 ntBASIC5.28□□□□□ -1.56
LDB2O43679 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 RNU6-171P-201ENST00000384354 107 ntBASIC5.27□□□□□ -1.57
LDB2O43679 MIR105-1-201ENST00000385222 81 ntBASIC5.27□□□□□ -1.57
LDB2O43679 U3.23-201ENST00000391132 200 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AC007068.1-201ENST00000396690 844 ntBASIC5.27□□□□□ -1.57
LDB2O43679 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 MIR1286-201ENST00000408112 78 ntBASIC5.27□□□□□ -1.57
LDB2O43679 RPL12P9-201ENST00000412942 488 ntBASIC5.27□□□□□ -1.57
LDB2O43679 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.27□□□□□ -1.57
LDB2O43679 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.27□□□□□ -1.57
LDB2O43679 MTCO1P51-201ENST00000427672 1060 ntBASIC5.27□□□□□ -1.57
LDB2O43679 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.27□□□□□ -1.57
LDB2O43679 FAM96AP1-201ENST00000430879 482 ntBASIC5.27□□□□□ -1.57
LDB2O43679 RPL7L1P9-201ENST00000431298 745 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.27□□□□□ -1.57
LDB2O43679 AC004854.1-201ENST00000440356 349 ntBASIC5.27□□□□□ -1.57
LDB2O43679 RPS11P7-201ENST00000442125 465 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 CCRL1P1-201ENST00000449542 1053 ntBASIC5.27□□□□□ -1.57
LDB2O43679 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LDB2O43679 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.27□□□□□ -1.57
LDB2O43679 RPL7P39-201ENST00000481157 744 ntBASIC5.27□□□□□ -1.57
LDB2O43679 UBA52P7-201ENST00000486088 380 ntBASIC5.27□□□□□ -1.57
LDB2O43679 RN7SL30P-201ENST00000488416 306 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.27□□□□□ -1.57
LDB2O43679 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.27□□□□□ -1.57
LDB2O43679 AC114322.1-201ENST00000506771 926 ntBASIC5.27□□□□□ -1.57
LDB2O43679 PGAM1P13-201ENST00000507497 754 ntBASIC5.27□□□□□ -1.57
LDB2O43679 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.27□□□□□ -1.57
LDB2O43679 AC006427.1-201ENST00000514359 712 ntBASIC5.27□□□□□ -1.57
LDB2O43679 RNU5A-7P-201ENST00000515979 116 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AC026407.1-201ENST00000518369 204 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.27□□□□□ -1.57
LDB2O43679 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.27□□□□□ -1.57
LDB2O43679 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.27□□□□□ -1.57
LDB2O43679 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AC106730.2-201ENST00000566641 540 ntBASIC5.27□□□□□ -1.57
LDB2O43679 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.27□□□□□ -1.57
LDB2O43679 AC023762.1-201ENST00000603280 584 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AP004372.1-201ENST00000604842 844 ntBASIC5.27□□□□□ -1.57
LDB2O43679 LSM1P2-201ENST00000604911 322 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AL022394.1-201ENST00000606979 292 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AC015922.4-201ENST00000612568 690 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AC008115.4-201ENST00000619780 775 ntBASIC5.27□□□□□ -1.57
LDB2O43679 AC007275.1-201ENST00000621243 671 ntBASIC5.27□□□□□ -1.57
LDB2O43679 MIR6719-201ENST00000622428 87 ntBASIC5.27□□□□□ -1.57
LDB2O43679 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.27□□□□□ -1.57
LDB2O43679 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.27□□□□□ -1.57
LDB2O43679 CYP4F35P-202ENST00000636121 390 ntBASIC5.27□□□□□ -1.57
LDB2O43679 CASC19-264ENST00000641912 1184 ntBASIC5.27□□□□□ -1.57
LDB2O43679 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LDB2O43679 DDX18P6-201ENST00000450119 1997 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms