Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RIPK2O43353 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.08□□□□□ -1.6
RIPK2O43353 SPATA2P1-201ENST00000431223 2055 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RIPK2O43353 DDX18P5-201ENST00000534547 1306 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIPK2O43353 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIPK2O43353 RNU6-1251P-201ENST00000364502 107 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.08□□□□□ -1.6
RIPK2O43353 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.08□□□□□ -1.6
RIPK2O43353 RNU6-225P-201ENST00000384613 103 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 SNORD65-201ENST00000391079 73 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.08□□□□□ -1.6
RIPK2O43353 AL390774.1-201ENST00000411924 246 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.08□□□□□ -1.6
RIPK2O43353 AC092570.3-201ENST00000420113 693 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.08□□□□□ -1.6
RIPK2O43353 BTG3P1-201ENST00000435859 716 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 AC012075.1-201ENST00000436549 580 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.08□□□□□ -1.6
RIPK2O43353 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.08□□□□□ -1.6
RIPK2O43353 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.08□□□□□ -1.6
RIPK2O43353 RPS29P9-201ENST00000440360 171 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.08□□□□□ -1.6
RIPK2O43353 EIF4A1P11-201ENST00000451239 222 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 STRADBP1-201ENST00000478954 1281 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.08□□□□□ -1.6
RIPK2O43353 UBA52P3-201ENST00000491303 382 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 RPS4XP20-201ENST00000505751 772 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.08□□□□□ -1.6
RIPK2O43353 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RIPK2O43353 AC012339.2-201ENST00000523996 453 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RIPK2O43353 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIPK2O43353 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.08□□□□□ -1.6
RIPK2O43353 AC084373.1-201ENST00000603311 235 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 AC104687.2-201ENST00000604442 342 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 AC131238.1-201ENST00000617135 328 ntBASIC5.08□□□□□ -1.6
RIPK2O43353 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.08□□□□□ -1.6
RIPK2O43353 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.08□□□□□ -1.6
RIPK2O43353 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIPK2O43353 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RIPK2O43353 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIPK2O43353 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIPK2O43353 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RIPK2O43353 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RIPK2O43353 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
RIPK2O43353 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RIPK2O43353 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RIPK2O43353 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
RIPK2O43353 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 AL022322.2-201ENST00000624072 20397 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RIPK2O43353 SNORA66-201ENST00000384792 133 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 RNU1-77P-201ENST00000390868 162 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.07□□□□□ -1.6
RIPK2O43353 RGS17P1-201ENST00000423358 553 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.07□□□□□ -1.6
RIPK2O43353 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 MRPL48P1-201ENST00000445390 636 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 RPL7P45-201ENST00000455851 743 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 Z92846.1-201ENST00000456203 268 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 RN7SL517P-201ENST00000462240 305 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 AC100832.1-201ENST00000471945 383 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 RN7SL591P-201ENST00000496150 292 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.07□□□□□ -1.6
RIPK2O43353 GTF2F2P1-201ENST00000511083 675 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.07□□□□□ -1.6
RIPK2O43353 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.07□□□□□ -1.6
RIPK2O43353 AC126177.5-201ENST00000549599 178 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.07□□□□□ -1.6
RIPK2O43353 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.07□□□□□ -1.6
RIPK2O43353 AC027281.1-201ENST00000574178 758 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.07□□□□□ -1.6
RIPK2O43353 AC117490.2-201ENST00000610042 594 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 WBP1LP8-201ENST00000617401 327 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RIPK2O43353 AL034370.1-201ENST00000397254 1590 ntBASIC5.07□□□□□ -1.6
RIPK2O43353 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RIPK2O43353 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RIPK2O43353 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RIPK2O43353 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RIPK2O43353 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RIPK2O43353 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RIPK2O43353 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
RIPK2O43353 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RIPK2O43353 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 AC107068.1-201ENST00000563286 4218 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AC009229.4-201ENST00000623854 1947 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 ATP5HP3-201ENST00000396994 486 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms