Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RN7SL356P-201ENST00000582228 248 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC006116.3-201ENST00000592968 361 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC092474.3-201ENST00000603022 568 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 TAS2R6P-201ENST00000605022 826 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC006213.5-201ENST00000619673 288 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 RLIMP2-201ENST00000427891 1563 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC131971.1-201ENST00000332881 1482 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC100757.1-201ENST00000616872 1835 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 RNU6-31P-201ENST00000384388 108 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AL589647.1-201ENST00000402485 466 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 Z86062.1-201ENST00000406773 777 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 U3.36-201ENST00000408418 213 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 RN7SKP125-201ENST00000410481 302 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC211486.3-201ENST00000412694 621 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AL357078.2-201ENST00000416486 427 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AL121878.1-201ENST00000418638 859 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 RPS26P13-201ENST00000419030 330 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC009784.1-201ENST00000426484 460 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 NDUFA5P10-201ENST00000432147 357 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AL590762.3-201ENST00000436372 640 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 MTND2P40-201ENST00000436718 841 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC073850.1-201ENST00000449243 255 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC009127.1-201ENST00000467090 155 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 RPL7P6-201ENST00000480903 738 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 RN7SL97P-201ENST00000486780 299 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC022133.1-201ENST00000490961 571 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 RPS23P1-201ENST00000491662 432 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 HMGN1P9-201ENST00000515212 298 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 SCARNA20.4-201ENST00000516969 131 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 OR8G3P-201ENST00000533406 921 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 YWHABP2-201ENST00000540201 713 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 NOP56P3-201ENST00000549457 385 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 NMNAT1P5-201ENST00000559657 841 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC005242.1-201ENST00000585658 438 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 MTCO3P22-201ENST00000603219 784 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC095055.1-201ENST00000603472 1113 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC135803.1-201ENST00000608748 565 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 RNA5SP439-201ENST00000617595 124 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 AC004158.1-201ENST00000564508 4319 ntBASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA3F8WFD2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC003973.3-201ENST00000624863 2822 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC110792.3-201ENST00000595906 1614 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC079298.1-201ENST00000625026 1619 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 PCAT14-202ENST00000627127 3935 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 RNA5SP305-201ENST00000362665 119 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms