Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC023813.2-201ENST00000564321 469 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC009094.1-201ENST00000564443 426 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 MIR4675-201ENST00000577898 77 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC091057.2-201ENST00000602594 792 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 DPRXP5-201ENST00000604662 539 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AL451049.1-201ENST00000608672 497 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AL592148.2-201ENST00000612210 372 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 MIR6793-201ENST00000612376 63 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC109309.2-201ENST00000612597 332 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AL353726.1-201ENST00000614041 1000 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 U6.48-201ENST00000618523 106 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC009039.2-201ENST00000624524 529 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC087821.2-201ENST00000637086 450 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 RBMY1HP-201ENST00000382759 1389 ntBASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA3Q9Y5H0 AP000473.2-201ENST00000602659 1537 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC025470.1-201ENST00000510053 2032 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 GNG5P2-201ENST00000372054 207 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 RNU6-1242P-201ENST00000391052 103 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 RPL23AP17-201ENST00000401064 499 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 ERHP2-201ENST00000402323 299 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 RNU6-77P-201ENST00000410554 91 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 RPL35AP31-201ENST00000418340 337 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC027644.1-201ENST00000419595 298 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 VN1R38P-201ENST00000450265 887 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 snoU13.29-201ENST00000459370 104 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC105313.1-201ENST00000509121 353 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC091515.1-201ENST00000548110 679 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC007448.1-201ENST00000582714 234 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 VN1R83P-201ENST00000595685 445 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC024257.5-201ENST00000612739 531 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC092608.3-201ENST00000625017 386 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC105235.1-201ENST00000623208 1816 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC104446.1-201ENST00000613728 1321 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AL606537.1-201ENST00000607258 2011 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 BIN2P1-201ENST00000504996 1530 ntBASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHGA3Q9Y5H0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC011416.1-201ENST00000514947 1732 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms