Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 COX6CP16-201ENST00000603667 216 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC106900.2-201ENST00000604994 317 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SL778P-201ENST00000607160 297 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC243773.3-201ENST00000613270 256 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC135068.11-201ENST00000636378 921 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 DDX10P2-201ENST00000417796 2614 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC090643.1-201ENST00000623600 3100 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 PPIAP22-201ENST00000358455 498 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 RNU6-282P-201ENST00000365357 103 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 SNORA11D-201ENST00000408548 128 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 MIR320C1-201ENST00000408566 88 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 SNORA11E-201ENST00000408778 128 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SKP266-201ENST00000410232 287 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC004987.3-201ENST00000413879 771 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 PPIAP23-201ENST00000420099 497 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 COX6CP17-201ENST00000421389 185 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AL359633.1-201ENST00000421403 310 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC092106.2-201ENST00000436597 487 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 CXCR2P1-202ENST00000443392 1074 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 RPL17P49-201ENST00000443728 411 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC234771.3-201ENST00000454984 622 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AL133480.2-201ENST00000456723 487 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SL180P-201ENST00000466769 294 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 RPL17P2-201ENST00000491913 451 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 PHBP17-201ENST00000528576 541 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 NANOGNBP2-201ENST00000544753 553 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 DPPA3P2-202ENST00000557188 1219 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC020661.2-201ENST00000560114 134 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AC005858.4-201ENST00000623191 700 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 CKAP2P1-201ENST00000555477 2049 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AP002364.1-201ENST00000623330 3386 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms