Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AL161722.2-201ENST00000434731 981 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 NIP7P2-201ENST00000485801 544 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 SNORD116-30-201ENST00000516468 85 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 OR8A2P-201ENST00000528631 952 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AP005432.2-201ENST00000608162 586 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC079395.2-201ENST00000610982 737 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AP000648.2-201ENST00000624182 404 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC136428.4-201ENST00000634254 1155 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC092747.4-201ENST00000620519 1861 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 MAPK10-304ENST00000641341 3984 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC009229.4-201ENST00000623854 1947 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC017079.1-201ENST00000333650 415 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 RNA5SP90-201ENST00000364801 99 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC013442.1-201ENST00000397347 228 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 OR3A2-201ENST00000408891 1076 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 RN7SKP59-201ENST00000410520 314 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AL121776.1-201ENST00000429337 372 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 RPL7L1P9-201ENST00000431298 745 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 CYCSP11-201ENST00000436426 315 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 RPL12P11-201ENST00000439970 501 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC096741.1-201ENST00000472250 846 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 RPL21P6-201ENST00000479171 504 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 RPL7P6-201ENST00000480903 738 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC012400.1-201ENST00000518452 381 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 IGLVIV-64-201ENST00000518581 301 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC022616.2-201ENST00000523185 300 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC011840.5-201ENST00000582125 771 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC133552.5-201ENST00000604266 540 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC109309.2-201ENST00000612597 332 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC015914.2-201ENST00000618167 288 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC009704.2-201ENST00000618739 483 ntBASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RHBDD3Q9Y3P4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 U3.3-201ENST00000362986 216 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AC019155.1-201ENST00000382242 574 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 SNORA67-201ENST00000384423 137 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 MIR143-201ENST00000385300 106 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms