Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT52Q9Y366 RPL10P14-201ENST00000565265 298 ntBASIC4.81□□□□□ -1.64
IFT52Q9Y366 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.81□□□□□ -1.64
IFT52Q9Y366 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
IFT52Q9Y366 AC011840.5-201ENST00000582125 771 ntBASIC4.81□□□□□ -1.64
IFT52Q9Y366 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.81□□□□□ -1.64
IFT52Q9Y366 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.81□□□□□ -1.64
IFT52Q9Y366 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.81□□□□□ -1.64
IFT52Q9Y366 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT52Q9Y366 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
IFT52Q9Y366 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
IFT52Q9Y366 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT52Q9Y366 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
IFT52Q9Y366 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
IFT52Q9Y366 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
IFT52Q9Y366 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.81□□□□□ -1.64
IFT52Q9Y366 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.81□□□□□ -1.64
IFT52Q9Y366 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.81□□□□□ -1.64
IFT52Q9Y366 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT52Q9Y366 NXF4-202ENST00000416098 1465 ntBASIC4.81□□□□□ -1.64
IFT52Q9Y366 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.81□□□□□ -1.64
IFT52Q9Y366 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 RNU1-77P-201ENST00000390868 162 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC009804.1-201ENST00000400949 179 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 AL390774.1-201ENST00000411924 246 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 CYCSP6-201ENST00000434498 302 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 CYCSP12-201ENST00000437729 300 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AL445433.1-201ENST00000457507 257 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 SEPT7P6-201ENST00000469999 1143 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 RPL7P6-201ENST00000480903 738 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 RN7SL547P-201ENST00000490793 290 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 RPEP1-201ENST00000504507 658 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC097173.1-201ENST00000505862 819 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT52Q9Y366 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 RNF138P2-201ENST00000603490 592 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 AP005131.7-201ENST00000610087 611 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 LINC00901.1-201ENST00000617252 152 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 AL121950.1-201ENST00000624993 2077 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT52Q9Y366 LINC01355-201ENST00000566551 5444 ntBASIC4.8□□□□□ -1.64
IFT52Q9Y366 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT52Q9Y366 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.8□□□□□ -1.64
IFT52Q9Y366 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT52Q9Y366 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
IFT52Q9Y366 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IFT52Q9Y366 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 U3.3-201ENST00000362986 216 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IFT52Q9Y366 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 SNORA67-201ENST00000384423 137 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 AL035079.1-201ENST00000405210 287 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 MIR1282-201ENST00000408865 101 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 MARK2P12-201ENST00000420129 585 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 COX6CP13-201ENST00000428703 226 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 AC004980.3-201ENST00000447046 365 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 AC022431.1-201ENST00000450941 438 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 AC108161.1-201ENST00000461060 402 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 RPS4XP20-201ENST00000505751 772 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 AC090568.1-201ENST00000509499 856 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 GTF2F2P1-201ENST00000511083 675 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 RNU6-319P-201ENST00000516025 108 ntBASIC4.79□□□□□ -1.64
IFT52Q9Y366 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.79□□□□□ -1.64
IFT52Q9Y366 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms