Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CLIC4P1-201ENST00000453177 535 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AL354710.1-201ENST00000453641 246 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC099560.2-201ENST00000457554 255 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 NPM1P29-201ENST00000483112 803 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 RN7SL591P-201ENST00000496150 292 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC117525.1-201ENST00000515228 503 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 SEC11B-201ENST00000518383 499 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC027369.2-201ENST00000528030 440 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AL512310.9-201ENST00000553311 948 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 SETP1-201ENST00000556014 845 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 DPRXP4-201ENST00000578053 568 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC005726.4-201ENST00000582858 458 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC079315.1-201ENST00000602952 623 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AP005432.2-201ENST00000608162 586 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 SNORD91B-202ENST00000608459 222 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AP005131.7-201ENST00000610087 611 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC097505.1-201ENST00000610199 565 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC132068.1-201ENST00000623805 459 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC092159.4-201ENST00000624944 550 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 AC093535.2-201ENST00000624769 2326 ntBASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
RCL1Q9Y2P8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC104118.1-201ENST00000607625 1589 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 RNA5SP90-201ENST00000364801 99 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 SNORA2.3-201ENST00000383920 135 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AL592291.1-201ENST00000403830 352 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AL662874.1-201ENST00000426065 230 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC115283.1-201ENST00000427353 400 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC002069.1-201ENST00000429649 1159 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 MTND6P18-201ENST00000439477 513 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 BUD31P2-201ENST00000449374 300 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AP006222.1-205ENST00000450734 457 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 OR52E7P-201ENST00000452394 933 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC008410.1-201ENST00000483777 339 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 RN7SL441P-201ENST00000492388 296 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 RBM22P1-201ENST00000578589 1214 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AP001496.3-201ENST00000580230 913 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AC129778.1-202ENST00000623812 261 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AL591379.1-207ENST00000635982 261 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RCL1Q9Y2P8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RCL1Q9Y2P8 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RCL1Q9Y2P8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.11□□□□□ -1.75
RCL1Q9Y2P8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RCL1Q9Y2P8 AC092747.4-201ENST00000620519 1861 ntBASIC4.11□□□□□ -1.75
RCL1Q9Y2P8 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.11□□□□□ -1.75
RCL1Q9Y2P8 AC092435.4-201ENST00000623012 4159 ntBASIC4.11□□□□□ -1.75
RCL1Q9Y2P8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RCL1Q9Y2P8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms