Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 U3.3-201ENST00000362986 216 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC234772.1-201ENST00000377927 937 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 U3.28-201ENST00000391249 210 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AL109941.1-201ENST00000401925 229 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 RN7SKP126-201ENST00000411143 300 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC115285.1-201ENST00000424879 736 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 RPL12P3-201ENST00000440080 396 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC004854.1-201ENST00000440356 349 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC092647.2-201ENST00000452998 253 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 OFD1P3Y-201ENST00000453312 783 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC069277.2-201ENST00000454211 432 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 DUXAP8-207ENST00000456786 622 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC104982.1-201ENST00000478775 574 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC008427.1-201ENST00000503102 655 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC147055.3-201ENST00000510547 851 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AP006245.2-201ENST00000522004 300 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC079064.1-201ENST00000528365 362 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC024940.3-201ENST00000538551 316 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC087888.1-201ENST00000550884 1254 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 SNX6P1-201ENST00000601728 1224 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC112503.1-201ENST00000608436 391 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 DUXAP10-204ENST00000612052 616 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC008993.2-201ENST00000631744 806 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 PANDAR-201ENST00000629595 1506 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC092070.2-203ENST00000598377 3644 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 AC020656.2-201ENST00000613291 5309 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL20A1Q9P218 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL20A1Q9P218 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL20A1Q9P218 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL20A1Q9P218 HSPD1P11-201ENST00000508643 1702 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL20A1Q9P218 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL20A1Q9P218 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 RNU6-796P-201ENST00000391086 107 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 CHMP1B2P-201ENST00000399581 597 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 XKRYP4-201ENST00000414395 483 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC008173.1-201ENST00000418901 264 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 RPA2P2-201ENST00000419698 796 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC073850.1-201ENST00000449243 255 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 XKRYP5-201ENST00000449659 483 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 RPL7P61-201ENST00000451721 751 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 CIR1P1-201ENST00000524055 1133 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC011492.1-201ENST00000600023 315 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC108738.1-201ENST00000603703 237 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC025175.1-201ENST00000606482 759 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC245100.7-201ENST00000609678 442 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AP003400.3-201ENST00000624904 346 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms