Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.2□□□□□ -1.58
HACD3Q9P035 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HACD3Q9P035 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HACD3Q9P035 PABPC1P6-201ENST00000445594 1829 ntBASIC5.2□□□□□ -1.58
HACD3Q9P035 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HACD3Q9P035 AC100778.3-201ENST00000580060 1750 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HACD3Q9P035 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.19□□□□□ -1.58
HACD3Q9P035 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HACD3Q9P035 RNU4-44P-201ENST00000363050 141 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 SNORA51.1-201ENST00000363243 140 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 RN7SKP113-201ENST00000363891 295 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 RNU6-670P-201ENST00000364312 104 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HACD3Q9P035 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HACD3Q9P035 AL390316.1-201ENST00000406279 553 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 DUTP5-201ENST00000406790 469 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HACD3Q9P035 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.19□□□□□ -1.58
HACD3Q9P035 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.19□□□□□ -1.58
HACD3Q9P035 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.19□□□□□ -1.58
HACD3Q9P035 AL031584.1-201ENST00000447169 754 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 MTND2P3-201ENST00000452458 470 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.19□□□□□ -1.58
HACD3Q9P035 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.19□□□□□ -1.58
HACD3Q9P035 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.19□□□□□ -1.58
HACD3Q9P035 MTND2P31-201ENST00000512602 616 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.19□□□□□ -1.58
HACD3Q9P035 AC138938.1-201ENST00000515431 782 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 MTND2P7-201ENST00000521337 640 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 OR4A46P-201ENST00000527255 933 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.19□□□□□ -1.58
HACD3Q9P035 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HACD3Q9P035 AC233702.9-201ENST00000581528 203 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.19□□□□□ -1.58
HACD3Q9P035 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.19□□□□□ -1.58
HACD3Q9P035 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.19□□□□□ -1.58
HACD3Q9P035 QTRT1P1-201ENST00000604344 1078 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 AC018695.5-201ENST00000605872 315 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 AL021368.1-201ENST00000607490 540 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.19□□□□□ -1.58
HACD3Q9P035 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.19□□□□□ -1.58
HACD3Q9P035 MIR6886-201ENST00000619864 61 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.19□□□□□ -1.58
HACD3Q9P035 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.19□□□□□ -1.58
HACD3Q9P035 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.19□□□□□ -1.58
HACD3Q9P035 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.19□□□□□ -1.58
HACD3Q9P035 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HACD3Q9P035 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HACD3Q9P035 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.19□□□□□ -1.58
HACD3Q9P035 LINC01355-201ENST00000566551 5444 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 AC235565.1-201ENST00000456962 1325 ntBASIC5.19□□□□□ -1.58
HACD3Q9P035 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HACD3Q9P035 MTCO1P15-201ENST00000529569 1526 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HACD3Q9P035 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HACD3Q9P035 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HACD3Q9P035 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HACD3Q9P035 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HACD3Q9P035 RNU6-1331P-201ENST00000363658 106 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HACD3Q9P035 MIR137-201ENST00000385223 102 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HACD3Q9P035 AL136116.2-201ENST00000404020 785 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.18□□□□□ -1.58
HACD3Q9P035 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.18□□□□□ -1.58
HACD3Q9P035 RNU6-564P-201ENST00000410983 104 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 PTP4A1P1-201ENST00000420539 515 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 TRIM60P13-201ENST00000432350 1283 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.18□□□□□ -1.58
HACD3Q9P035 NPM1P33-201ENST00000438918 872 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 AC245047.2-201ENST00000441060 530 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 FAR2P1-206ENST00000449736 709 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.18□□□□□ -1.58
HACD3Q9P035 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.18□□□□□ -1.58
HACD3Q9P035 AL389915.2-201ENST00000454576 441 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.18□□□□□ -1.58
HACD3Q9P035 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.18□□□□□ -1.58
HACD3Q9P035 AC079841.1-201ENST00000481228 950 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.18□□□□□ -1.58
HACD3Q9P035 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.18□□□□□ -1.58
HACD3Q9P035 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.18□□□□□ -1.58
HACD3Q9P035 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HACD3Q9P035 AL390726.5-202ENST00000564800 256 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.18□□□□□ -1.58
HACD3Q9P035 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HACD3Q9P035 MIR4489-201ENST00000578869 62 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 AC011840.5-201ENST00000582125 771 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.18□□□□□ -1.58
HACD3Q9P035 FAM60CP-201ENST00000591086 664 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 BNIP3P35-201ENST00000604530 490 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 MIR6826-201ENST00000617808 98 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 MIR6729-201ENST00000618194 65 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 AC099494.2-201ENST00000623371 978 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 AP002505.2-201ENST00000623585 696 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 AL139254.3-201ENST00000641097 674 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 STX3-208ENST00000641815 3236 ntBASIC5.18□□□□□ -1.58
HACD3Q9P035 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.18□□□□□ -1.58
HACD3Q9P035 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HACD3Q9P035 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms