Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
TM9SF3Q9HD45 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
TM9SF3Q9HD45 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
TM9SF3Q9HD45 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 CASC19-221ENST00000641309 1382 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 RNA5SP241-201ENST00000391326 114 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AL078599.1-201ENST00000402075 293 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC009302.1-201ENST00000417147 390 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 EI24P4-201ENST00000423683 1078 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 TRY2P-201ENST00000448860 689 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 RPL10P17-201ENST00000453852 316 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 RPL37AP8-201ENST00000494116 276 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC021106.1-201ENST00000509020 1058 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC098976.1-201ENST00000513014 541 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC012400.1-201ENST00000518452 381 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 RN7SL290P-201ENST00000578661 300 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 BNIP3P41-202ENST00000616656 861 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 AC083843.2-201ENST00000568248 6253 ntBASIC5.21□□□□□ -1.58
TM9SF3Q9HD45 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 RNU6-178P-201ENST00000384631 104 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 NCSTNP1-201ENST00000406229 144 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 HSPE1P16-201ENST00000426640 348 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 RPS4XP16-201ENST00000427198 791 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC012512.1-201ENST00000446594 718 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 OR52E3P-201ENST00000452083 936 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC092324.1-201ENST00000468671 324 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 RN7SL591P-201ENST00000496150 292 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 MIR4472-2-201ENST00000582069 67 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 MIR3936-201ENST00000584304 110 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC011487.3-201ENST00000593607 453 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC009027.1-201ENST00000604510 479 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 uc_338.7-201ENST00000621834 124 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 FRG1EP-201ENST00000634469 770 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 THAP12P5-201ENST00000405864 2275 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.2□□□□□ -1.58
TM9SF3Q9HD45 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TM9SF3Q9HD45 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms