Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 Y_RNA.710-201ENST00000516975 110 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 RNA5SP400-201ENST00000517155 111 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AC011853.1-201ENST00000518911 454 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 RPA2P3-201ENST00000533268 770 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 UBE2NP1-201ENST00000545592 458 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AC125612.1-201ENST00000547580 377 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AC006530.1-201ENST00000555980 571 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AC122134.1-201ENST00000565664 1104 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AC135628.1-201ENST00000568867 534 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AP005136.1-201ENST00000579765 429 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AC135507.1-201ENST00000607214 561 ntBASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM39Q9HCM9 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 Z99496.1-201ENST00000469424 1477 ntBASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.15□□□□□ -1.43
TRIM39Q9HCM9 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AL355852.1-201ENST00000454081 1771 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 VN1R12P-201ENST00000403778 876 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 RN7SKP161-201ENST00000411110 305 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 SETP9-201ENST00000423837 832 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC245884.2-201ENST00000426257 404 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 PSMD10P2-201ENST00000432890 672 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 OR3D1P-201ENST00000438288 955 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 PPIAP17-201ENST00000438507 471 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC073387.1-201ENST00000453261 709 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 RN7SL170P-201ENST00000487098 295 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 DYNLL1P6-201ENST00000503440 264 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC098799.3-201ENST00000506095 438 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 RPL7L1P4-201ENST00000513004 707 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 OR8A2P-201ENST00000528631 952 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC006512.2-201ENST00000543250 486 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AP000619.2-201ENST00000546014 969 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 MRPS21P8-201ENST00000569196 235 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 ISCA1P3-201ENST00000577104 373 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 NPIPB1P-202ENST00000588786 828 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC011453.2-201ENST00000603737 729 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AF001550.2-201ENST00000636643 217 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 AC024651.2-201ENST00000562480 2098 ntBASIC6.14□□□□□ -1.43
TRIM39Q9HCM9 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms