Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL359715.4-201ENST00000606629 1436 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 OR13C3-201ENST00000374781 1108 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 HMGB3P19-201ENST00000403971 560 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 RN7SKP278-201ENST00000410504 342 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC096533.1-201ENST00000411645 353 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AL158825.1-201ENST00000414735 521 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC241520.1-201ENST00000422654 1099 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 MTCYBP21-201ENST00000443300 1113 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 EEF1B2P6-201ENST00000445713 673 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 RPL7P55-201ENST00000450522 746 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 RPL21P18-201ENST00000469899 480 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 RNA5SP230-201ENST00000517039 122 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC010376.1-201ENST00000522101 334 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC104229.1-201ENST00000561364 255 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC124283.4-201ENST00000581815 456 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 MIR7853-201ENST00000584820 132 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AL606834.3-201ENST00000602615 496 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AL512427.1-201ENST00000618593 349 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 ZNF90P1-201ENST00000480493 1951 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 CASC19-248ENST00000641674 1356 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 GSTA12P-201ENST00000402398 508 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 PPIAP9-201ENST00000403866 498 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AL355615.1-201ENST00000406187 641 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 GAPDHP42-201ENST00000406848 981 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 RMRPP5-201ENST00000411156 267 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 VPS26BP1-201ENST00000417155 755 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 PRUNEP1-201ENST00000425846 705 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AL136231.1-201ENST00000429407 730 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 RPL12P18-201ENST00000437175 325 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 HMGB1P26-201ENST00000452520 628 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 OR2AO1P-201ENST00000476497 403 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 EIF1P7-201ENST00000487533 337 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 SUMO2P5-201ENST00000506790 245 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 RN7SKP265-201ENST00000516448 223 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC087894.1-201ENST00000538359 518 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms