Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 OR7E25P-202ENST00000641088 5937 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 RNU6-433P-201ENST00000363216 104 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 RN7SKP160-201ENST00000363804 340 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 SNORA63.7-201ENST00000365579 123 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 U3.52-201ENST00000384034 216 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 Y_RNA.481-201ENST00000384373 102 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 SNORD65.1-201ENST00000390889 71 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AL589994.1-201ENST00000404962 340 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 MIR548F4-201ENST00000408515 105 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AL663061.1-201ENST00000416625 580 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC093698.1-201ENST00000423843 571 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 RPL5P6-201ENST00000425640 886 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 SNORA81.1-201ENST00000458922 177 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 OR7E99P-201ENST00000505750 922 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 OR51K1P-201ENST00000510214 950 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC034159.1-201ENST00000513885 583 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 CYCSP25-201ENST00000525280 316 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 YWHABP2-201ENST00000540201 713 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 RPL10P14-201ENST00000565265 298 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC026898.1-201ENST00000586404 571 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AL391646.1-201ENST00000603860 190 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AP005137.2-201ENST00000609238 400 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 MIR7150-201ENST00000614393 94 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC234782.5-201ENST00000617723 324 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 LRRC37A6P-202ENST00000448648 5444 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 EXOC7P1-201ENST00000509881 2059 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 CUBNP1-201ENST00000412710 1790 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC018688.1-201ENST00000636528 1754 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 TATDN2P3-201ENST00000452855 3665 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC051619.3-201ENST00000560646 2426 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 PEX12P1-201ENST00000400284 1048 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 RN7SKP254-201ENST00000410685 310 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 ATP5LP2-201ENST00000440646 311 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AL831737.1-201ENST00000441288 271 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms