Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RN7SKP46-201ENST00000515942 234 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC005377.1-201ENST00000605126 456 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 IMMP1LP1-201ENST00000605170 488 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 BNIP3P7-201ENST00000605641 516 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AL022401.1-201ENST00000619498 108 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC019206.1-201ENST00000621938 425 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC012414.7-202ENST00000622705 1090 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 SNORA17.5-201ENST00000630429 132 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AL034370.1-201ENST00000397254 1590 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AP000580.1-201ENST00000404439 358 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AL512422.1-201ENST00000407033 553 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 RPS20P25-201ENST00000412447 352 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 OR52B5P-201ENST00000435337 951 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC000111.2-201ENST00000448200 210 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC011225.1-201ENST00000457751 369 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 CYCSP34-201ENST00000458172 304 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 RPS21P4-201ENST00000487122 248 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 BX510359.5-201ENST00000515651 304 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AP005262.1-201ENST00000582646 997 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC095055.1-201ENST00000603472 1113 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 MIR6837-201ENST00000620884 64 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC099494.2-201ENST00000623371 978 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 OR52B5P-202ENST00000641118 1110 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 CASC19-264ENST00000641912 1184 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 AC093909.5-201ENST00000621839 1799 ntBASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDHD3Q9BSH5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 RNU6-249P-201ENST00000363016 102 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 RNU6-1331P-201ENST00000363658 106 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 U3.35-201ENST00000408405 208 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 RN7SKP125-201ENST00000410481 302 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 TBCAP2-201ENST00000416175 326 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 RHOT1P3-201ENST00000436571 331 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AC004938.1-201ENST00000438468 308 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 SPRYD7P1-201ENST00000443861 570 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 TDGF1P1-201ENST00000445734 527 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AC016687.1-201ENST00000482574 353 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms