Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 YES1P1-201ENST00000418510 1628 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC091305.2-201ENST00000624049 1576 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDK5RAP1Q96SZ6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CDK5RAP1Q96SZ6 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.09□□□□□ -1.44
CDK5RAP1Q96SZ6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.09□□□□□ -1.44
CDK5RAP1Q96SZ6 TCP1P3-201ENST00000414406 1498 ntBASIC6.09□□□□□ -1.44
CDK5RAP1Q96SZ6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC117409.1-201ENST00000470499 1310 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 Y_RNA.559-201ENST00000384686 107 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC092642.1-201ENST00000392417 425 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AL603865.2-201ENST00000401679 213 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 OR2AT2P-201ENST00000413438 905 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 MRPL53P1-201ENST00000414323 319 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 MTND4LP21-201ENST00000415303 295 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC021876.1-201ENST00000425959 359 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC096775.1-201ENST00000437724 448 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 RPS12P17-201ENST00000438591 377 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AL008629.1-201ENST00000438615 184 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC015983.1-201ENST00000441577 373 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC006326.1-201ENST00000445465 787 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC093166.4-201ENST00000457867 318 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 RPSAP37-201ENST00000470913 821 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 NPM1P29-201ENST00000483112 803 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 TRBV5-2-201ENST00000489095 273 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 RPF2P2-201ENST00000504693 896 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 MIR2117-201ENST00000516780 80 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-889P-201ENST00000517189 103 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 MTCO2P15-201ENST00000532655 656 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF415P1-201ENST00000582279 1166 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC083760.1-201ENST00000589621 670 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AP002802.2-201ENST00000605877 235 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 PART1_2.1-201ENST00000612397 250 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 RN7SL544P-201ENST00000617232 284 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AL645927.2-201ENST00000618350 349 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 RN7SL763P-201ENST00000620922 284 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 AC069234.4-201ENST00000621276 412 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 Z69908.1-201ENST00000622603 247 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 OR11H2-202ENST00000641517 1085 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 MIR193BHG-214ENST00000641765 509 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 KARSP1-201ENST00000451871 1752 ntBASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP1Q96SZ6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms