Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TAS2R6P-201ENST00000605022 826 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 AP005432.2-201ENST00000608162 586 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 SDR42E1P1-201ENST00000611327 477 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC009163.6-201ENST00000612367 342 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC009950.2-201ENST00000636548 183 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 AC011503.2-201ENST00000594230 1500 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 RN7SKP114-201ENST00000410327 279 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 DDX39BP1-205ENST00000422507 192 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 NPM1P33-201ENST00000438918 872 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 MYO5BP2-201ENST00000449815 1277 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 AC092647.2-201ENST00000452998 253 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 CYCSP34-201ENST00000458172 304 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 GYG1P1-201ENST00000460864 698 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 AC097484.1-201ENST00000471148 389 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 AL671862.1-201ENST00000515851 349 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 AC092490.3-201ENST00000545370 572 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 AGGF1P9-201ENST00000561884 913 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 OR7E18P-201ENST00000592589 702 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 RPSAP73-201ENST00000614820 330 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 MAPK10-349ENST00000641767 3661 ntBASIC4.72□□□□□ -1.65
COL21A1Q96P44 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
COL21A1Q96P44 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL21A1Q96P44 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL21A1Q96P44 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL21A1Q96P44 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL21A1Q96P44 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL21A1Q96P44 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL21A1Q96P44 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 U8.4-201ENST00000363626 134 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 BMS1P13-201ENST00000417301 885 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL21A1Q96P44 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AL627308.1-201ENST00000435693 821 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 KNOP1P3-201ENST00000446933 426 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 AL356981.1-201ENST00000454879 684 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 RN7SL441P-201ENST00000492388 296 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC008953.1-201ENST00000497334 318 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC093763.2-201ENST00000505334 1223 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 RNA5SP249-201ENST00000516127 99 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 RNU6-943P-201ENST00000516960 98 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 RPL23AP53-201ENST00000521854 457 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 MIR3691-201ENST00000578066 90 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC006116.3-201ENST00000592968 361 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC096586.2-201ENST00000610260 441 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms