Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 Z99289.3-201ENST00000605586 594 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AP000484.1-201ENST00000620067 1252 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 RPL23AP61-201ENST00000623642 466 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS50Q96JG6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS50Q96JG6 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS50Q96JG6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC104260.2-201ENST00000623551 3497 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS50Q96JG6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS50Q96JG6 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS50Q96JG6 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 SELENOWP1-201ENST00000322792 252 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 TMSB4XP4-201ENST00000323496 618 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS50Q96JG6 SNORD56.4-201ENST00000363883 71 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 RPL11P3-201ENST00000395256 523 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 HMGB1P10-201ENST00000395823 563 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AP002784.2-201ENST00000397300 549 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 RN7SKP286-201ENST00000410894 299 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 RN7SKP293-201ENST00000411389 296 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC245060.4-201ENST00000413293 1121 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 RPA2P2-201ENST00000419698 796 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 NANOGP5-201ENST00000424456 877 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 NAP1L4P2-201ENST00000425958 899 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC092634.2-201ENST00000428146 1010 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AL445928.1-201ENST00000435545 222 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 PA2G4P6-201ENST00000438325 1197 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AL512593.1-201ENST00000444758 779 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 RPL6P5-201ENST00000445678 828 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC069540.1-201ENST00000446320 988 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 TPT1P1-201ENST00000458495 518 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 COX6B1P2-201ENST00000489624 230 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 TPT1P3-201ENST00000492841 512 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 BTG4P1-201ENST00000510421 183 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC114781.3-201ENST00000512083 142 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC112673.1-201ENST00000513168 575 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 MTND2P38-201ENST00000522536 667 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC126615.2-201ENST00000553003 515 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 RN7SL622P-201ENST00000585292 275 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC006115.2-201ENST00000596823 202 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AL513327.3-201ENST00000602618 469 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC145423.1-201ENST00000605712 336 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC025175.1-201ENST00000606482 759 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC093673.2-201ENST00000609674 331 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 MIR6768-201ENST00000610734 72 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AL021918.2-201ENST00000613415 194 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC126175.1-201ENST00000617041 758 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC006386.1-201ENST00000619436 415 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC093775.1-201ENST00000624154 1868 ntBASIC5.57□□□□□ -1.52
VPS50Q96JG6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS50Q96JG6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
VPS50Q96JG6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS50Q96JG6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 RN7SKP145-201ENST00000363291 303 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 ATP5HP3-201ENST00000396994 486 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 RPL35AP3-201ENST00000414680 288 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms