Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 NDUFA5P8-201ENST00000449019 346 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 Z92846.1-201ENST00000456203 268 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 SETP20-201ENST00000457046 852 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AC023424.1-201ENST00000496058 459 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AC136428.4-201ENST00000634254 1155 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 SAMMSON-227ENST00000642114 1199 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AL022311.1-201ENST00000623726 19416 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PDLIM5Q96HC4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PDLIM5Q96HC4 AC010329.2-201ENST00000595195 2737 ntBASIC5.09□□□□□ -1.6
PDLIM5Q96HC4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PDLIM5Q96HC4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 MIR323A-201ENST00000362199 86 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 RNU6-532P-201ENST00000384318 107 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AL390316.1-201ENST00000406279 553 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 SNORA11.5-201ENST00000408163 128 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC007738.1-201ENST00000413892 348 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AL513325.1-201ENST00000417716 1034 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 EI24P4-201ENST00000423683 1078 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC108075.1-201ENST00000424692 529 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 COX6CP13-201ENST00000428703 226 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 RPL7L1P9-201ENST00000431298 745 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 NDUFA5P10-201ENST00000432147 357 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC012512.1-201ENST00000446594 718 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC069304.1-201ENST00000491593 704 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 RN7SL441P-201ENST00000492388 296 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 PGAM1P13-201ENST00000507497 754 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 GTF2F2P1-201ENST00000511083 675 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 BX510359.5-201ENST00000515651 304 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 RNU6-513P-201ENST00000516104 104 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 RNU6-889P-201ENST00000517189 103 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC134349.2-201ENST00000535136 910 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC006272.2-201ENST00000594725 163 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC079395.2-201ENST00000610982 737 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 BX005214.3-202ENST00000619809 325 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 CYP4F35P-202ENST00000636121 390 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 CASC19-264ENST00000641912 1184 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 HSPD1P11-201ENST00000508643 1702 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC025574.1-201ENST00000554784 1653 ntBASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM5Q96HC4 AC017002.4-201ENST00000604721 1525 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 RN7SKP160-201ENST00000363804 340 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms