Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR378C-201ENST00000578683 81 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 MIR3149-201ENST00000584629 83 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AC010525.2-201ENST00000590920 195 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 RPL26P30-202ENST00000602923 645 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 CYP2C61P-201ENST00000604072 290 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC115621.1-201ENST00000604653 858 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC021646.1-201ENST00000605469 484 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC103710.3-201ENST00000608157 948 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC068213.1-201ENST00000625124 226 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 AC124045.1-201ENST00000606008 1953 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC7.64□□□□□ -1.19
HLA-CQ95604 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 CD36-221ENST00000534394 1741 ntTSL 2 BASIC7.64□□□□□ -1.19
HLA-CQ95604 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-CQ95604 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
HLA-CQ95604 TTC3P1-201ENST00000399586 6081 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-CQ95604 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AC145207.5-201ENST00000582866 2682 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AC011155.1-201ENST00000316512 456 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 RNU6-251P-201ENST00000363235 104 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 RNA5SP382-201ENST00000363355 112 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 SNORA32.2-201ENST00000384049 122 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 RNU6-1297P-201ENST00000384415 104 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 AL136116.1-201ENST00000403591 381 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 RN7SKP188-201ENST00000410789 317 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 Y_RNA.618-201ENST00000410949 107 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-CQ95604 SLC35E1P1-201ENST00000419313 864 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 RPL17P17-201ENST00000419491 557 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AC128677.1-201ENST00000436016 442 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 AC092106.2-201ENST00000436597 487 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 RSU1P2-202ENST00000437884 485 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 AC234771.2-201ENST00000445718 597 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 UOX-201ENST00000471089 899 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 RN7SL70P-201ENST00000478322 302 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 RN7SKP233-201ENST00000517005 110 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.63□□□□□ -1.19
HLA-CQ95604 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.63□□□□□ -1.19
HLA-CQ95604 MIR3680-2-201ENST00000578247 87 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 RN7SL230P-201ENST00000580835 303 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 MIR3680-1-201ENST00000581433 87 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 AC087588.2-201ENST00000617667 426 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 OR1N1-202ENST00000619659 939 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 AC009318.4-201ENST00000620496 486 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-CQ95604 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-CQ95604 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-CQ95604 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.63□□□□□ -1.19
HLA-CQ95604 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
HLA-CQ95604 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-CQ95604 AC130360.2-201ENST00000533477 1556 ntBASIC7.63□□□□□ -1.19
HLA-CQ95604 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms