Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 PPIAP6-201ENST00000557078 499 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 MIR212-201ENST00000586026 110 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 RPL7AP69-201ENST00000595306 806 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 TAS2R6P-201ENST00000605022 826 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC103710.3-201ENST00000608157 948 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC084781.2-201ENST00000615568 161 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AL049541.2-201ENST00000626377 555 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC010886.1-201ENST00000437380 2869 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 RN7SKP250-201ENST00000363924 321 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 PEX12P1-201ENST00000400284 1048 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AL603766.1-201ENST00000407763 664 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 RNA5SP155-201ENST00000411154 129 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 EIF1P3-201ENST00000423841 334 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC093698.1-201ENST00000423843 571 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 RIMKLBP2-201ENST00000424737 654 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 MTCO1P3-201ENST00000429327 192 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AL138899.2-201ENST00000439139 499 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC023274.2-201ENST00000445264 521 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC073072.2-201ENST00000447425 348 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 SNRPFP4-201ENST00000456366 242 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 RN7SL390P-201ENST00000470634 284 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC074386.1-201ENST00000476560 767 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC027544.3-201ENST00000535082 757 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AL390334.1-201ENST00000556395 450 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC012507.3-201ENST00000603556 477 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 DPPA3P3-201ENST00000603842 430 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AL355333.1-201ENST00000605632 279 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC104184.1-201ENST00000607513 721 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC104237.2-201ENST00000612456 443 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC087821.2-201ENST00000637086 450 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 PPBPP2-201ENST00000513150 1362 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 AC012078.1-201ENST00000405035 1646 ntBASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NPAS3Q8IXF0 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms