Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 snoU13.20-201ENST00000459180 104 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 RN7SL205P-201ENST00000490174 284 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 RN7SL591P-201ENST00000496150 292 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 BNIP3P1-201ENST00000547295 580 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AC023158.1-201ENST00000561632 1025 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AC027216.1-201ENST00000577726 685 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 CBX3P2-202ENST00000583365 535 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 RN7SL52P-201ENST00000584271 284 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AC005776.1-201ENST00000603164 290 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 SUMO2P14-201ENST00000604488 293 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AC092953.2-201ENST00000608000 699 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 RN7SL722P-201ENST00000617780 284 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 RN7SL565P-201ENST00000618246 284 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AC092451.3-201ENST00000625067 1343 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 CASC19-221ENST00000641309 1382 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AL121950.1-201ENST00000624993 2077 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AL355488.2-201ENST00000609909 2850 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC007382.1-201ENST00000624376 2618 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 HSPA8P14-201ENST00000552265 1805 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AL359715.4-201ENST00000606629 1436 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 RNA5SP91-201ENST00000390902 119 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AL445213.1-201ENST00000412589 747 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AL590806.1-201ENST00000415818 853 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 RPL5P2-201ENST00000429598 854 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 SCAND3P1-201ENST00000439854 1060 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AL672167.3-201ENST00000465951 960 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC015908.1-201ENST00000478739 476 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC020779.1-201ENST00000478757 796 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 EIF3KP3-201ENST00000514461 639 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 PMS2P3-207ENST00000529061 717 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC063949.1-201ENST00000552900 865 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AL049870.4-201ENST00000555741 486 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 DHFRP1-201ENST00000579682 559 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 H3F3BP2-201ENST00000583907 357 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 AP001033.2-201ENST00000609701 1003 ntBASIC5.86□□□□□ -1.47
HERC6Q8IVU3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HERC6Q8IVU3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HERC6Q8IVU3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.85□□□□□ -1.47
HERC6Q8IVU3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HERC6Q8IVU3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HERC6Q8IVU3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HERC6Q8IVU3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HERC6Q8IVU3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.85□□□□□ -1.47
HERC6Q8IVU3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms