Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LYSMD3Q7Z3D4 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC011592.1-201ENST00000624647 3634 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 MAPK10-323ENST00000641493 3207 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC023886.2-201ENST00000321285 411 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 Y_RNA.202-201ENST00000364083 110 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RNA5SP302-201ENST00000364896 100 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 SNORA33.2-201ENST00000365413 134 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RNU6-196P-201ENST00000384315 107 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RNU6-1300P-201ENST00000391046 108 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RPL23AP47-201ENST00000408017 460 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RN7SKP32-201ENST00000410167 303 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RNU6-195P-201ENST00000411352 109 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC134879.1-201ENST00000426062 394 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC005033.1-201ENST00000428904 813 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 USP9YP16-201ENST00000430287 407 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RPS7P4-201ENST00000444127 582 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RPL23AP20-201ENST00000447965 421 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 USP9YP23-201ENST00000455085 407 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RPS10P28-201ENST00000480396 498 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RPL7AP30-201ENST00000482859 796 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RN7SL797P-201ENST00000486314 297 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RN7SL776P-201ENST00000493390 268 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 NACAP6-201ENST00000509572 622 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 KCTD9P2-201ENST00000512203 1013 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC026782.1-201ENST00000512952 449 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RNU7-30P-201ENST00000516835 62 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC126177.6-201ENST00000550420 1009 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC068802.1-201ENST00000603420 732 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 COX6CP16-201ENST00000603667 216 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC007621.1-201ENST00000604544 437 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC104184.1-201ENST00000607513 721 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC103710.4-201ENST00000609301 899 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 PISRT1-201ENST00000626175 531 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 AC100871.1-201ENST00000507871 1456 ntBASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LYSMD3Q7Z3D4 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms