Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC021422.1-201ENST00000621212 473 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 RN7SKP185-201ENST00000362813 326 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 RNA5SP223-201ENST00000365174 120 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 MIR449B-201ENST00000384995 97 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 PPIAP31-201ENST00000405422 495 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 H3F3BP1-201ENST00000440551 403 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC245028.2-201ENST00000458673 253 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 ZNF415P1-201ENST00000582279 1166 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC108467.2-201ENST00000617640 1597 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC011933.1-201ENST00000413334 321 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC116533.1-201ENST00000459748 321 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 SNORA74C-1-201ENST00000580726 201 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC006116.5-201ENST00000591936 559 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 AP001160.4-201ENST00000596971 382 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 SNORA73.1-201ENST00000363107 205 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 QRSL1P2-201ENST00000418582 964 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 MTND2P40-201ENST00000436718 841 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC006326.1-201ENST00000445465 787 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 RPL23AP43-201ENST00000446445 471 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AL121890.2-201ENST00000617644 465 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 AC244100.1-202ENST00000621554 382 ntBASIC3.79□□□□□ -1.8
VPS13CQ709C8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS13CQ709C8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS13CQ709C8 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 VN1R37P-201ENST00000419096 748 ntBASIC3.78□□□□□ -1.8
VPS13CQ709C8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 RPL5P32-201ENST00000454085 879 ntBASIC3.78□□□□□ -1.8
VPS13CQ709C8 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 GAPDHP14-201ENST00000450472 937 ntBASIC3.78□□□□□ -1.8
VPS13CQ709C8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 PSMB7P1-201ENST00000556349 514 ntBASIC3.78□□□□□ -1.8
VPS13CQ709C8 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms