Protein–RNA interactions for Protein: Q3V6T2

CCDC88A, Girdin, humanhuman

Predictions only

Length 1,871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88AQ3V6T2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CCDC88AQ3V6T2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC88AQ3V6T2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC88AQ3V6T2 AC007998.4-201ENST00000612496 2533 ntBASIC6.01□□□□□ -1.45
CCDC88AQ3V6T2 MIR129-1-201ENST00000384972 72 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 NPM1P18-201ENST00000434232 732 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AC046176.1-201ENST00000435260 1170 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 MTND2P28-201ENST00000457540 1044 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 MED28P5-201ENST00000528254 438 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AC068831.4-201ENST00000556118 109 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 MIR4429-201ENST00000580105 73 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 OR56B2P-202ENST00000641377 2453 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AL137058.3-201ENST00000624531 3099 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 MIR589-201ENST00000385238 99 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 RNA5SP241-201ENST00000391326 114 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AL732292.1-201ENST00000426692 226 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AC016772.1-201ENST00000444170 1261 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AC116562.1-201ENST00000485355 781 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 MTCO1P35-201ENST00000515270 228 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 NPM1P6-201ENST00000521088 871 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 AC008785.1-201ENST00000624475 456 ntBASIC6□□□□□ -1.45
CCDC88AQ3V6T2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CCDC88AQ3V6T2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AC010618.1-201ENST00000469924 477 ntBASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 RNA5SP439-201ENST00000617595 124 ntBASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AL022401.1-201ENST00000619498 108 ntBASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 AL442639.1-201ENST00000625030 1899 ntBASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC88AQ3V6T2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 OR4K17-201ENST00000315543 1032 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AL359837.1-201ENST00000381357 287 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 OR6C69P-201ENST00000394268 893 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC025750.1-201ENST00000399891 379 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC079809.1-201ENST00000415468 276 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 SCAND3P1-201ENST00000439854 1060 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC073052.1-201ENST00000440417 714 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 OR52E3P-201ENST00000452083 936 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 OR2A3P-201ENST00000493774 953 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC073358.1-201ENST00000505671 684 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 NPM1P5-201ENST00000557228 838 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 ZNF402P-201ENST00000404435 3100 ntBASIC5.98□□□□□ -1.45
CCDC88AQ3V6T2 AC009951.1-201ENST00000623674 2614 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms