Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 MRE11P1-201ENST00000464884 2127 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC012254.3-201ENST00000591183 2117 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC046144.1-201ENST00000478559 1853 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 RNA5SP375-201ENST00000362975 119 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC119751.3-201ENST00000399720 670 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC099063.2-201ENST00000446360 662 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC016027.4-201ENST00000450866 277 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC010306.1-201ENST00000523223 1117 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 YWHABP2-201ENST00000540201 713 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AL020997.3-201ENST00000602843 359 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AC008536.1-201ENST00000602872 669 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AL445423.1-201ENST00000609941 536 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 AL031658.2-201ENST00000616850 651 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC144BQ3MJ40 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CCDC144BQ3MJ40 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
CCDC144BQ3MJ40 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 RNU105B-201ENST00000364478 208 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 Y_RNA.472-201ENST00000384322 102 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 RNU11-201ENST00000387069 134 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 OR7E101P-201ENST00000400428 513 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 MTCO2P31-201ENST00000402702 684 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 FCF1P5-201ENST00000406490 482 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 SNORA11C-201ENST00000408532 129 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 MIR1303-201ENST00000408625 86 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 VPS26BP1-201ENST00000417155 755 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC005005.2-201ENST00000420779 380 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 RPS15AP30-201ENST00000420976 390 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 HIGD1AP12-201ENST00000427832 281 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 MTCO2P20-201ENST00000437339 673 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC004022.1-201ENST00000447766 1066 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AL606490.1-201ENST00000452266 765 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 HMGB1P4-201ENST00000455362 567 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 RPL7AP52-201ENST00000458096 790 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC005410.1-202ENST00000460347 485 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 RN7SL629P-201ENST00000489622 285 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms