Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN1BQ07699 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN1BQ07699 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 ELOCP3-201ENST00000439303 348 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AL353093.1-201ENST00000441292 436 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 SUMO2P1-206ENST00000445436 284 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AC239809.1-201ENST00000450470 217 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AZGP1P2-201ENST00000454506 345 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AL591473.1-201ENST00000464297 313 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AL122020.1-201ENST00000472287 459 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 NPM1P17-201ENST00000479221 602 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 NPM1P29-201ENST00000483112 803 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 IGBP1P4-201ENST00000503202 879 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AC111193.1-201ENST00000504097 155 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN1BQ07699 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.83□□□□□ -1.64
SCN1BQ07699 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 OR5H7P-201ENST00000514084 930 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 RNU6-941P-201ENST00000516346 108 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 SNORA76.2-201ENST00000517095 137 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AC139365.2-201ENST00000517972 253 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN1BQ07699 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 AP002812.4-201ENST00000532139 286 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN1BQ07699 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.83□□□□□ -1.64
SCN1BQ07699 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN1BQ07699 AC009237.13-201ENST00000603193 276 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 MIR6780B-201ENST00000610307 79 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 MIR6793-201ENST00000612376 63 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 AP000648.2-201ENST00000624182 404 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.83□□□□□ -1.64
SCN1BQ07699 AL451142.2-201ENST00000429076 2090 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SCN1BQ07699 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
SCN1BQ07699 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 AL445437.1-201ENST00000623157 3087 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN1BQ07699 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN1BQ07699 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AL450345.1-202ENST00000605741 3881 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC006042.3-201ENST00000454684 1469 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 LINC01355-201ENST00000566551 5444 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SCN1BQ07699 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN1BQ07699 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN1BQ07699 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 RN7SKP292-201ENST00000365522 317 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 MIR130A-201ENST00000385274 89 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AL357752.1-201ENST00000412817 349 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 RPS6P23-201ENST00000413224 722 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC019050.1-201ENST00000418508 492 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN1BQ07699 BX284632.2-201ENST00000421091 399 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC069154.1-201ENST00000432914 542 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SCN1BQ07699 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC110602.1-201ENST00000437414 318 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 NPM1P33-201ENST00000438918 872 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AL512605.1-202ENST00000441919 381 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AL359955.2-201ENST00000445380 353 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN1BQ07699 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC006511.1-201ENST00000470614 315 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 RPL32P33-201ENST00000487023 394 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 RN7SL591P-201ENST00000496150 292 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN1BQ07699 HMGN1P9-201ENST00000515212 298 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 RNU6-1102P-201ENST00000516149 96 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 SCARNA18.1-201ENST00000516330 83 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 SCARNA6.1-201ENST00000516989 238 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN1BQ07699 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN1BQ07699 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN1BQ07699 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC006512.2-201ENST00000543250 486 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AC090515.3-201ENST00000560431 315 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN1BQ07699 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN1BQ07699 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN1BQ07699 ZNF92P2-201ENST00000600543 1059 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC018618.2-201ENST00000604770 446 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC090607.5-201ENST00000615692 224 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms