Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC020779.1-201ENST00000478757 796 ntBASIC4.37□□□□□ -1.71
UBA52P62987 AC020890.1-201ENST00000491837 504 ntBASIC4.37□□□□□ -1.71
UBA52P62987 AC093890.1-201ENST00000502554 540 ntBASIC4.37□□□□□ -1.71
UBA52P62987 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.37□□□□□ -1.71
UBA52P62987 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.37□□□□□ -1.71
UBA52P62987 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.37□□□□□ -1.71
UBA52P62987 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.37□□□□□ -1.71
UBA52P62987 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 RPL10P14-201ENST00000565265 298 ntBASIC4.37□□□□□ -1.71
UBA52P62987 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.37□□□□□ -1.71
UBA52P62987 RN7SL176P-201ENST00000580352 264 ntBASIC4.37□□□□□ -1.71
UBA52P62987 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.37□□□□□ -1.71
UBA52P62987 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.37□□□□□ -1.71
UBA52P62987 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.37□□□□□ -1.71
UBA52P62987 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.37□□□□□ -1.71
UBA52P62987 AL121890.2-201ENST00000617644 465 ntBASIC4.37□□□□□ -1.71
UBA52P62987 AL445528.2-201ENST00000620582 470 ntBASIC4.37□□□□□ -1.71
UBA52P62987 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
UBA52P62987 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
UBA52P62987 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.37□□□□□ -1.71
UBA52P62987 AC063976.2-201ENST00000425667 3556 ntBASIC4.37□□□□□ -1.71
UBA52P62987 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 AL133268.1-201ENST00000405676 1401 ntBASIC4.37□□□□□ -1.71
UBA52P62987 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
UBA52P62987 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.36□□□□□ -1.71
UBA52P62987 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.36□□□□□ -1.71
UBA52P62987 SCARNA15-201ENST00000607520 4325 ntBASIC4.36□□□□□ -1.71
UBA52P62987 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.36□□□□□ -1.71
UBA52P62987 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UBA52P62987 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UBA52P62987 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.36□□□□□ -1.71
UBA52P62987 RNA5SP223-201ENST00000365174 120 ntBASIC4.36□□□□□ -1.71
UBA52P62987 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.36□□□□□ -1.71
UBA52P62987 E2F6P2-201ENST00000420708 748 ntBASIC4.36□□□□□ -1.71
UBA52P62987 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.36□□□□□ -1.71
UBA52P62987 GSTM5P1-201ENST00000434751 660 ntBASIC4.36□□□□□ -1.71
UBA52P62987 PA2G4P6-201ENST00000438325 1197 ntBASIC4.36□□□□□ -1.71
UBA52P62987 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.36□□□□□ -1.71
UBA52P62987 ARL4AP3-201ENST00000441452 574 ntBASIC4.36□□□□□ -1.71
UBA52P62987 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.36□□□□□ -1.71
UBA52P62987 Z80107.2-201ENST00000445127 392 ntBASIC4.36□□□□□ -1.71
UBA52P62987 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.36□□□□□ -1.71
UBA52P62987 AC108751.2-201ENST00000469993 231 ntBASIC4.36□□□□□ -1.71
UBA52P62987 AC073073.1-201ENST00000493920 463 ntBASIC4.36□□□□□ -1.71
UBA52P62987 AC015864.1-201ENST00000496512 544 ntBASIC4.36□□□□□ -1.71
UBA52P62987 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UBA52P62987 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.36□□□□□ -1.71
UBA52P62987 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.36□□□□□ -1.71
UBA52P62987 HMGB1P44-201ENST00000508597 572 ntBASIC4.36□□□□□ -1.71
UBA52P62987 MTND6P2-201ENST00000512226 524 ntBASIC4.36□□□□□ -1.71
UBA52P62987 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.36□□□□□ -1.71
UBA52P62987 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.36□□□□□ -1.71
UBA52P62987 AC013701.1-201ENST00000522657 465 ntBASIC4.36□□□□□ -1.71
UBA52P62987 HNRNPRP2-201ENST00000528421 743 ntBASIC4.36□□□□□ -1.71
UBA52P62987 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.36□□□□□ -1.71
UBA52P62987 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.36□□□□□ -1.71
UBA52P62987 CR383656.6-201ENST00000550518 394 ntBASIC4.36□□□□□ -1.71
UBA52P62987 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.36□□□□□ -1.71
UBA52P62987 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.36□□□□□ -1.71
UBA52P62987 AL451049.1-201ENST00000608672 497 ntBASIC4.36□□□□□ -1.71
UBA52P62987 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.36□□□□□ -1.71
UBA52P62987 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
UBA52P62987 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.36□□□□□ -1.71
UBA52P62987 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.36□□□□□ -1.71
UBA52P62987 CYP4F35P-202ENST00000636121 390 ntBASIC4.36□□□□□ -1.71
UBA52P62987 LINC01739-205ENST00000641890 573 ntBASIC4.36□□□□□ -1.71
UBA52P62987 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
UBA52P62987 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UBA52P62987 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UBA52P62987 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.36□□□□□ -1.71
UBA52P62987 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UBA52P62987 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
UBA52P62987 CASC19-281ENST00000642118 1554 ntBASIC4.36□□□□□ -1.71
UBA52P62987 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 SALL4P2-201ENST00000423288 2910 ntBASIC4.35□□□□□ -1.71
UBA52P62987 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
UBA52P62987 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 SNORA17.1-201ENST00000362945 126 ntBASIC4.35□□□□□ -1.71
UBA52P62987 SNORA16A-201ENST00000384342 137 ntBASIC4.35□□□□□ -1.71
UBA52P62987 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
UBA52P62987 AC007161.1-204ENST00000423039 460 ntBASIC4.35□□□□□ -1.71
UBA52P62987 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.35□□□□□ -1.71
UBA52P62987 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 AC092647.3-201ENST00000443044 633 ntBASIC4.35□□□□□ -1.71
UBA52P62987 DNAJB5P1-201ENST00000454004 806 ntBASIC4.35□□□□□ -1.71
UBA52P62987 BX284632.1-201ENST00000478218 541 ntBASIC4.35□□□□□ -1.71
UBA52P62987 RPL23AP37-201ENST00000479658 549 ntBASIC4.35□□□□□ -1.71
UBA52P62987 AC021146.3-201ENST00000511911 260 ntBASIC4.35□□□□□ -1.71
UBA52P62987 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.35□□□□□ -1.71
UBA52P62987 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.35□□□□□ -1.71
UBA52P62987 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms