Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
VSX2P58304 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VSX2P58304 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VSX2P58304 INTS6P1-201ENST00000504674 2530 ntBASIC4.8□□□□□ -1.64
VSX2P58304 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VSX2P58304 CDY11P-201ENST00000447168 1651 ntBASIC4.8□□□□□ -1.64
VSX2P58304 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VSX2P58304 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.79□□□□□ -1.64
VSX2P58304 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 AC022417.1-201ENST00000624768 1303 ntBASIC4.79□□□□□ -1.64
VSX2P58304 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.79□□□□□ -1.64
VSX2P58304 SNORA51.8-201ENST00000384234 132 ntBASIC4.79□□□□□ -1.64
VSX2P58304 AL109941.1-201ENST00000401925 229 ntBASIC4.79□□□□□ -1.64
VSX2P58304 AL133270.1-201ENST00000402635 279 ntBASIC4.79□□□□□ -1.64
VSX2P58304 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 CBX1P3-201ENST00000413296 527 ntBASIC4.79□□□□□ -1.64
VSX2P58304 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.79□□□□□ -1.64
VSX2P58304 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.79□□□□□ -1.64
VSX2P58304 CHEK2P3-201ENST00000416118 248 ntBASIC4.79□□□□□ -1.64
VSX2P58304 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.79□□□□□ -1.64
VSX2P58304 RANP7-201ENST00000418085 644 ntBASIC4.79□□□□□ -1.64
VSX2P58304 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.79□□□□□ -1.64
VSX2P58304 VN1R54P-201ENST00000435210 1049 ntBASIC4.79□□□□□ -1.64
VSX2P58304 PRPF38AP2-201ENST00000438179 851 ntBASIC4.79□□□□□ -1.64
VSX2P58304 PA2G4P6-201ENST00000438325 1197 ntBASIC4.79□□□□□ -1.64
VSX2P58304 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.79□□□□□ -1.64
VSX2P58304 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.79□□□□□ -1.64
VSX2P58304 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.79□□□□□ -1.64
VSX2P58304 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.79□□□□□ -1.64
VSX2P58304 AC100784.1-201ENST00000522790 310 ntBASIC4.79□□□□□ -1.64
VSX2P58304 AC012339.2-201ENST00000523996 453 ntBASIC4.79□□□□□ -1.64
VSX2P58304 OR5AZ1P-201ENST00000527448 943 ntBASIC4.79□□□□□ -1.64
VSX2P58304 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.79□□□□□ -1.64
VSX2P58304 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.79□□□□□ -1.64
VSX2P58304 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.79□□□□□ -1.64
VSX2P58304 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.79□□□□□ -1.64
VSX2P58304 AC011487.3-201ENST00000593607 453 ntBASIC4.79□□□□□ -1.64
VSX2P58304 AC024940.4-201ENST00000605507 246 ntBASIC4.79□□□□□ -1.64
VSX2P58304 AL356752.1-201ENST00000615844 593 ntBASIC4.79□□□□□ -1.64
VSX2P58304 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.79□□□□□ -1.64
VSX2P58304 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.79□□□□□ -1.64
VSX2P58304 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.79□□□□□ -1.64
VSX2P58304 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.79□□□□□ -1.64
VSX2P58304 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VSX2P58304 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VSX2P58304 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.79□□□□□ -1.64
VSX2P58304 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.78□□□□□ -1.64
VSX2P58304 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.78□□□□□ -1.64
VSX2P58304 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.78□□□□□ -1.64
VSX2P58304 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 RN7SKP95-201ENST00000362860 303 ntBASIC4.78□□□□□ -1.64
VSX2P58304 MIR550A3-201ENST00000390735 95 ntBASIC4.78□□□□□ -1.64
VSX2P58304 AL021331.1-201ENST00000402817 582 ntBASIC4.78□□□□□ -1.64
VSX2P58304 RPL21P67-201ENST00000402896 478 ntBASIC4.78□□□□□ -1.64
VSX2P58304 AP002530.1-201ENST00000405705 684 ntBASIC4.78□□□□□ -1.64
VSX2P58304 AF186996.5-201ENST00000418098 904 ntBASIC4.78□□□□□ -1.64
VSX2P58304 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.78□□□□□ -1.64
VSX2P58304 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VSX2P58304 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.78□□□□□ -1.64
VSX2P58304 TXNP5-201ENST00000441043 315 ntBASIC4.78□□□□□ -1.64
VSX2P58304 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.78□□□□□ -1.64
VSX2P58304 PRPF38AP1-201ENST00000451976 933 ntBASIC4.78□□□□□ -1.64
VSX2P58304 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.78□□□□□ -1.64
VSX2P58304 AP001922.4-201ENST00000526967 290 ntBASIC4.78□□□□□ -1.64
VSX2P58304 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.78□□□□□ -1.64
VSX2P58304 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.78□□□□□ -1.64
VSX2P58304 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.78□□□□□ -1.64
VSX2P58304 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.78□□□□□ -1.64
VSX2P58304 AC011840.5-201ENST00000582125 771 ntBASIC4.78□□□□□ -1.64
VSX2P58304 AC005377.1-201ENST00000605126 456 ntBASIC4.78□□□□□ -1.64
VSX2P58304 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.78□□□□□ -1.64
VSX2P58304 AL445528.2-201ENST00000620582 470 ntBASIC4.78□□□□□ -1.64
VSX2P58304 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.78□□□□□ -1.64
VSX2P58304 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.78□□□□□ -1.64
VSX2P58304 TET1P1-201ENST00000426627 2301 ntBASIC4.78□□□□□ -1.64
VSX2P58304 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VSX2P58304 HCFC2P1-201ENST00000392864 1592 ntBASIC4.78□□□□□ -1.64
VSX2P58304 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.78□□□□□ -1.64
VSX2P58304 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VSX2P58304 TRIM51GP-201ENST00000534741 1350 ntBASIC4.78□□□□□ -1.64
VSX2P58304 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms