Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 AL132640.2-201ENST00000559968 1698 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN6P56747 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN6P56747 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN6P56747 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN6P56747 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN6P56747 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN6P56747 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CLDN6P56747 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLDN6P56747 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN6P56747 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN6P56747 AL049693.1-201ENST00000402760 611 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 SNORA81-201ENST00000408493 178 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 GPS2P1-201ENST00000411761 986 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 AC117434.1-201ENST00000419971 836 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 AC007064.3-201ENST00000422608 359 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
CLDN6P56747 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN6P56747 AC079168.1-201ENST00000458741 345 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 AC020898.1-201ENST00000474167 787 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 IGBP1P4-201ENST00000503202 879 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN6P56747 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.86□□□□□ -1.63
CLDN6P56747 HMGN1P9-201ENST00000515212 298 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 AC019322.1-201ENST00000571869 389 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 EIF1P5-201ENST00000585002 234 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 AC068790.7-201ENST00000602347 528 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 AC002069.2-201ENST00000603580 883 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 AL359757.1-201ENST00000623176 255 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN6P56747 AC020633.1-201ENST00000468439 2247 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 MAPK10-328ENST00000641553 4009 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN6P56747 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN6P56747 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN6P56747 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN6P56747 Z95331.1-201ENST00000623075 23112 ntBASIC4.86□□□□□ -1.63
CLDN6P56747 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN6P56747 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CLDN6P56747 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN6P56747 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLDN6P56747 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 IGKV7-3-201ENST00000357453 298 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 Y_RNA.126-201ENST00000363382 111 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.85□□□□□ -1.63
CLDN6P56747 AC234781.4-201ENST00000419384 244 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AL034379.1-201ENST00000423216 253 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 RSL24D1P6-201ENST00000426934 401 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.85□□□□□ -1.63
CLDN6P56747 FTLP19-201ENST00000433300 394 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AC073143.1-201ENST00000436316 395 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN6P56747 RN7SL41P-201ENST00000476144 297 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 RPL7P41-201ENST00000485823 957 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 GAPDHP56-201ENST00000506031 988 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AC026402.1-201ENST00000513642 170 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AC079064.1-201ENST00000528365 362 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN6P56747 NMNAT1P1-201ENST00000554095 876 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AC011626.1-201ENST00000604710 562 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AL590392.1-201ENST00000604960 446 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN6P56747 AP000473.2-201ENST00000602659 1537 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN6P56747 AC002525.1-201ENST00000624392 1622 ntBASIC4.85□□□□□ -1.63
CLDN6P56747 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN6P56747 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN6P56747 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
CLDN6P56747 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLDN6P56747 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLDN6P56747 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN6P56747 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CLDN6P56747 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN6P56747 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CLDN6P56747 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN6P56747 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CLDN6P56747 AC099654.2-201ENST00000433031 1980 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN6P56747 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN6P56747 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.84□□□□□ -1.63
CLDN6P56747 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN6P56747 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN6P56747 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN6P56747 RN7SKP106-201ENST00000410832 272 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 RPL17P36-201ENST00000420302 549 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 CHIAP3-201ENST00000423668 1133 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 OR1H1P-201ENST00000448731 937 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 SEPT7P3-201ENST00000455017 621 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms