Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 AC083899.2-201ENST00000423285 1376 ntBASIC4.88□□□□□ -1.63
CDH11P55287 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.87□□□□□ -1.63
CDH11P55287 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH11P55287 SMG1P4-204ENST00000523028 4131 ntBASIC4.87□□□□□ -1.63
CDH11P55287 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH11P55287 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH11P55287 RNU6-792P-201ENST00000363490 107 ntBASIC4.87□□□□□ -1.63
CDH11P55287 RNU4-2-201ENST00000365668 141 ntBASIC4.87□□□□□ -1.63
CDH11P55287 OR13C3-201ENST00000374781 1108 ntBASIC4.87□□□□□ -1.63
CDH11P55287 MIR551A-201ENST00000385042 96 ntBASIC4.87□□□□□ -1.63
CDH11P55287 SNORD65-201ENST00000391079 73 ntBASIC4.87□□□□□ -1.63
CDH11P55287 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH11P55287 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH11P55287 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 ARL2BPP3-201ENST00000421226 480 ntBASIC4.87□□□□□ -1.63
CDH11P55287 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.87□□□□□ -1.63
CDH11P55287 BX510359.3-201ENST00000422168 306 ntBASIC4.87□□□□□ -1.63
CDH11P55287 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH11P55287 CFL1P1-202ENST00000432948 411 ntBASIC4.87□□□□□ -1.63
CDH11P55287 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH11P55287 AL627224.1-201ENST00000448334 444 ntBASIC4.87□□□□□ -1.63
CDH11P55287 EIF2S2P5-201ENST00000457635 968 ntBASIC4.87□□□□□ -1.63
CDH11P55287 RPL35AP19-201ENST00000469425 329 ntBASIC4.87□□□□□ -1.63
CDH11P55287 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH11P55287 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
CDH11P55287 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH11P55287 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH11P55287 RN7SKP99-201ENST00000517028 307 ntBASIC4.87□□□□□ -1.63
CDH11P55287 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CDH11P55287 AC100784.1-201ENST00000522790 310 ntBASIC4.87□□□□□ -1.63
CDH11P55287 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.87□□□□□ -1.63
CDH11P55287 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH11P55287 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH11P55287 AC006349.1-201ENST00000555526 235 ntBASIC4.87□□□□□ -1.63
CDH11P55287 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH11P55287 AC233266.2-201ENST00000567067 528 ntBASIC4.87□□□□□ -1.63
CDH11P55287 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH11P55287 AC015911.5-201ENST00000587076 451 ntBASIC4.87□□□□□ -1.63
CDH11P55287 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.87□□□□□ -1.63
CDH11P55287 MTCO3P22-201ENST00000603219 784 ntBASIC4.87□□□□□ -1.63
CDH11P55287 AC013244.1-201ENST00000604279 193 ntBASIC4.87□□□□□ -1.63
CDH11P55287 AC120053.1-201ENST00000607706 736 ntBASIC4.87□□□□□ -1.63
CDH11P55287 AC005840.5-201ENST00000619166 599 ntBASIC4.87□□□□□ -1.63
CDH11P55287 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH11P55287 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CDH11P55287 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH11P55287 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 NEAT1-202ENST00000501122 22743 ntBASIC4.87□□□□□ -1.63
CDH11P55287 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CDH11P55287 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 TCP1P3-201ENST00000414406 1498 ntBASIC4.87□□□□□ -1.63
CDH11P55287 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH11P55287 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH11P55287 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH11P55287 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CDH11P55287 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.86□□□□□ -1.63
CDH11P55287 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 AC245100.2-201ENST00000454544 1679 ntBASIC4.86□□□□□ -1.63
CDH11P55287 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH11P55287 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH11P55287 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH11P55287 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH11P55287 AC010132.2-201ENST00000295493 1043 ntBASIC4.86□□□□□ -1.63
CDH11P55287 OR9G4-201ENST00000302957 984 ntBASIC4.86□□□□□ -1.63
CDH11P55287 RN7SKP28-201ENST00000364770 305 ntBASIC4.86□□□□□ -1.63
CDH11P55287 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH11P55287 AC002524.1-201ENST00000411687 547 ntBASIC4.86□□□□□ -1.63
CDH11P55287 OR6C64P-201ENST00000419708 825 ntBASIC4.86□□□□□ -1.63
CDH11P55287 AL121882.1-201ENST00000422893 417 ntBASIC4.86□□□□□ -1.63
CDH11P55287 UBE2D3P3-201ENST00000426992 425 ntBASIC4.86□□□□□ -1.63
CDH11P55287 GXYLT1P1-201ENST00000446657 490 ntBASIC4.86□□□□□ -1.63
CDH11P55287 VDAC2P4-201ENST00000452925 711 ntBASIC4.86□□□□□ -1.63
CDH11P55287 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDH11P55287 LARP7P4-201ENST00000481075 878 ntBASIC4.86□□□□□ -1.63
CDH11P55287 AC022133.1-201ENST00000490961 571 ntBASIC4.86□□□□□ -1.63
CDH11P55287 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.86□□□□□ -1.63
CDH11P55287 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH11P55287 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH11P55287 HMGB1P46-201ENST00000520062 610 ntBASIC4.86□□□□□ -1.63
CDH11P55287 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.86□□□□□ -1.63
CDH11P55287 AC113192.3-201ENST00000529152 742 ntBASIC4.86□□□□□ -1.63
CDH11P55287 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms