Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RN7SL443P-201ENST00000464331 290 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 RN7SL244P-201ENST00000493405 297 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCN3P51790 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCN3P51790 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCN3P51790 AC008126.1-201ENST00000549019 480 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCN3P51790 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCN3P51790 AC011487.3-201ENST00000593607 453 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 OR4H6P-202ENST00000603819 340 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 AL162574.1-201ENST00000615702 950 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCN3P51790 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCN3P51790 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCN3P51790 AC092451.3-201ENST00000625067 1343 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CLCN3P51790 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CLCN3P51790 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCN3P51790 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.62□□□□□ -1.51
CLCN3P51790 BX284613.1-201ENST00000452221 1641 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CLCN3P51790 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCN3P51790 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCN3P51790 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 RNU6-1251P-201ENST00000364502 107 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 OR13C3-201ENST00000374781 1108 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCN3P51790 AC009506.2-201ENST00000420635 840 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCN3P51790 MRPS21P2-201ENST00000424704 264 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 AL606490.7-201ENST00000433136 191 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 AL049745.1-201ENST00000433953 286 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCN3P51790 SNRPFP2-201ENST00000440710 251 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCN3P51790 TCEA1P1-201ENST00000449716 880 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 AC104629.2-201ENST00000468627 598 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCN3P51790 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCN3P51790 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCN3P51790 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCN3P51790 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.61□□□□□ -1.51
CLCN3P51790 AC021006.3-201ENST00000530771 192 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CLCN3P51790 AC092868.3-201ENST00000560515 784 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 AC003985.2-201ENST00000562268 1669 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCN3P51790 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.61□□□□□ -1.51
CLCN3P51790 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCN3P51790 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCN3P51790 AL450345.1-202ENST00000605741 3881 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCN3P51790 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.61□□□□□ -1.51
CLCN3P51790 AC009120.7-201ENST00000623452 780 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 AP003499.2-201ENST00000624100 483 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 AC080188.3-201ENST00000624842 748 ntBASIC5.61□□□□□ -1.51
CLCN3P51790 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.61□□□□□ -1.51
CLCN3P51790 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLCN3P51790 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CLCN3P51790 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CLCN3P51790 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLCN3P51790 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLCN3P51790 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCN3P51790 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCN3P51790 AC011503.2-201ENST00000594230 1500 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCN3P51790 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLCN3P51790 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCN3P51790 RN7SKP113-201ENST00000363891 295 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 MIR421-201ENST00000365696 85 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 OR1L6-202ENST00000373684 1044 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 SNORA2.3-201ENST00000383920 135 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLCN3P51790 RNA5SP241-201ENST00000391326 114 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 MTND4LP7-201ENST00000431728 294 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 RPL17P35-201ENST00000432217 549 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 AL137845.2-201ENST00000444292 988 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms