Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MTND2P31-201ENST00000512602 616 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.37□□□□□ -1.55
LHX1P48742 AP001804.2-201ENST00000533932 910 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AC008033.2-201ENST00000542626 177 ntBASIC5.37□□□□□ -1.55
LHX1P48742 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.37□□□□□ -1.55
LHX1P48742 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.37□□□□□ -1.55
LHX1P48742 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.37□□□□□ -1.55
LHX1P48742 OR1F2P-201ENST00000570470 933 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AC011840.5-201ENST00000582125 771 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.37□□□□□ -1.55
LHX1P48742 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.37□□□□□ -1.55
LHX1P48742 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.37□□□□□ -1.55
LHX1P48742 AC008536.1-201ENST00000602872 669 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AC002069.2-201ENST00000603580 883 ntBASIC5.37□□□□□ -1.55
LHX1P48742 MEMO1P5-201ENST00000604810 406 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AC018695.5-201ENST00000605872 315 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AC104307.1-201ENST00000616142 196 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AC009032.1-201ENST00000617574 431 ntBASIC5.37□□□□□ -1.55
LHX1P48742 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.37□□□□□ -1.55
LHX1P48742 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
LHX1P48742 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LHX1P48742 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LHX1P48742 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LHX1P48742 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LHX1P48742 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.37□□□□□ -1.55
LHX1P48742 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LHX1P48742 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LHX1P48742 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.36□□□□□ -1.55
LHX1P48742 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LHX1P48742 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.36□□□□□ -1.55
LHX1P48742 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.36□□□□□ -1.55
LHX1P48742 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.36□□□□□ -1.55
LHX1P48742 RN7SKP95-201ENST00000362860 303 ntBASIC5.36□□□□□ -1.55
LHX1P48742 SNORA51.8-201ENST00000384234 132 ntBASIC5.36□□□□□ -1.55
LHX1P48742 ATP5HP3-201ENST00000396994 486 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AL021331.1-201ENST00000402817 582 ntBASIC5.36□□□□□ -1.55
LHX1P48742 CHEK2P3-201ENST00000416118 248 ntBASIC5.36□□□□□ -1.55
LHX1P48742 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.36□□□□□ -1.55
LHX1P48742 RPS26P13-201ENST00000419030 330 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AL356806.1-201ENST00000422524 916 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AC106901.1-201ENST00000425086 698 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AL590762.4-201ENST00000425885 253 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AL445528.1-201ENST00000426330 420 ntBASIC5.36□□□□□ -1.55
LHX1P48742 RPL5P2-201ENST00000429598 854 ntBASIC5.36□□□□□ -1.55
LHX1P48742 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LHX1P48742 PRPF38AP2-201ENST00000438179 851 ntBASIC5.36□□□□□ -1.55
LHX1P48742 RPS29P9-201ENST00000440360 171 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AC073648.4-201ENST00000442655 781 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.36□□□□□ -1.55
LHX1P48742 SUMO2P1-206ENST00000445436 284 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AC005412.2-201ENST00000492004 341 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AL049874.2-201ENST00000492636 288 ntBASIC5.36□□□□□ -1.55
LHX1P48742 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.36□□□□□ -1.55
LHX1P48742 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.36□□□□□ -1.55
LHX1P48742 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LHX1P48742 AL512310.9-201ENST00000553311 948 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AC019322.1-201ENST00000571869 389 ntBASIC5.36□□□□□ -1.55
LHX1P48742 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.36□□□□□ -1.55
LHX1P48742 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.36□□□□□ -1.55
LHX1P48742 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.36□□□□□ -1.55
LHX1P48742 AL022394.1-201ENST00000606979 292 ntBASIC5.36□□□□□ -1.55
LHX1P48742 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.36□□□□□ -1.55
LHX1P48742 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LHX1P48742 AC003985.2-201ENST00000562268 1669 ntBASIC5.36□□□□□ -1.55
LHX1P48742 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LHX1P48742 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LHX1P48742 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.36□□□□□ -1.55
LHX1P48742 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.36□□□□□ -1.55
LHX1P48742 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.36□□□□□ -1.55
LHX1P48742 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LHX1P48742 AC112198.2-201ENST00000426589 6996 ntBASIC5.36□□□□□ -1.55
LHX1P48742 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LHX1P48742 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LHX1P48742 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.35□□□□□ -1.55
LHX1P48742 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.35□□□□□ -1.55
LHX1P48742 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.35□□□□□ -1.55
LHX1P48742 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.35□□□□□ -1.55
LHX1P48742 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LHX1P48742 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LHX1P48742 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LHX1P48742 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LHX1P48742 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.35□□□□□ -1.55
LHX1P48742 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LHX1P48742 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.35□□□□□ -1.55
LHX1P48742 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.35□□□□□ -1.55
LHX1P48742 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.35□□□□□ -1.55
LHX1P48742 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.35□□□□□ -1.55
LHX1P48742 MTCO1P45-201ENST00000431457 267 ntBASIC5.35□□□□□ -1.55
LHX1P48742 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.35□□□□□ -1.55
LHX1P48742 ARL5AP3-201ENST00000439327 386 ntBASIC5.35□□□□□ -1.55
LHX1P48742 SNRPFP2-201ENST00000440710 251 ntBASIC5.35□□□□□ -1.55
LHX1P48742 SBDSP1-204ENST00000453858 737 ntBASIC5.35□□□□□ -1.55
LHX1P48742 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.35□□□□□ -1.55
LHX1P48742 MTND6P32-201ENST00000457611 483 ntBASIC5.35□□□□□ -1.55
LHX1P48742 AC089999.1-201ENST00000460336 374 ntBASIC5.35□□□□□ -1.55
LHX1P48742 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.35□□□□□ -1.55
LHX1P48742 NPM1P28-201ENST00000492269 840 ntBASIC5.35□□□□□ -1.55
LHX1P48742 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.35□□□□□ -1.55
LHX1P48742 OR4V1P-201ENST00000525394 1140 ntBASIC5.35□□□□□ -1.55
LHX1P48742 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms